KEGG   PATHWAY: gab01100
Entry
gab01100                    Pathway                                
Name
Metabolic pathways - Gossypium arboreum (tree cotton)
Class
Pathway map
gab01100  Metabolic pathways
gab01100

Module
gab_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gab01100]
gab_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gab01100]
gab_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gab01100]
gab_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:gab01100]
gab_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gab01100]
gab_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:gab01100]
gab_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gab01100]
gab_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:gab01100]
gab_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:gab01100]
gab_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:gab01100]
gab_M00012  Glyoxylate cycle [PATH:gab01100]
gab_M00015  Proline biosynthesis, glutamate => proline [PATH:gab01100]
gab_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:gab01100]
gab_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:gab01100]
gab_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:gab01100]
gab_M00021  Cysteine biosynthesis, serine => cysteine [PATH:gab01100]
gab_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:gab01100]
gab_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:gab01100]
gab_M00026  Histidine biosynthesis, PRPP => histidine [PATH:gab01100]
gab_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:gab01100]
gab_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:gab01100]
gab_M00034  Methionine salvage pathway [PATH:gab01100]
gab_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:gab01100]
gab_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:gab01100]
gab_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:gab01100]
gab_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:gab01100]
gab_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:gab01100]
gab_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gab01100]
gab_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gab01100]
gab_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gab01100]
gab_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gab01100]
gab_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gab01100]
gab_M00055  N-glycan precursor biosynthesis [PATH:gab01100]
gab_M00073  N-glycan precursor trimming [PATH:gab01100]
gab_M00081  Pectin degradation [PATH:gab01100]
gab_M00082  Fatty acid biosynthesis, initiation [PATH:gab01100]
gab_M00083  Fatty acid biosynthesis, elongation [PATH:gab01100]
gab_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:gab01100]
gab_M00087  beta-Oxidation [PATH:gab01100]
gab_M00089  Triacylglycerol biosynthesis [PATH:gab01100]
gab_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:gab01100]
gab_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:gab01100]
gab_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:gab01100]
gab_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:gab01100]
gab_M00098  Acylglycerol degradation [PATH:gab01100]
gab_M00100  Sphingosine degradation [PATH:gab01100]
gab_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:gab01100]
gab_M00113  Jasmonic acid biosynthesis [PATH:gab01100]
gab_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:gab01100]
gab_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:gab01100]
gab_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:gab01100]
gab_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:gab01100]
gab_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:gab01100]
gab_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:gab01100]
gab_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:gab01100]
gab_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:gab01100]
gab_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:gab01100]
gab_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:gab01100]
gab_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:gab01100]
gab_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:gab01100]
gab_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:gab01100]
gab_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:gab01100]
gab_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:gab01100]
gab_M00148  Succinate dehydrogenase (ubiquinone) [PATH:gab01100]
gab_M00151  Cytochrome bc1 complex respiratory unit [PATH:gab01100]
gab_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:gab01100]
gab_M00161  Photosystem II [PATH:gab01100]
gab_M00163  Photosystem I [PATH:gab01100]
gab_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:gab01100]
gab_M00168  CAM (Crassulacean acid metabolism), dark [PATH:gab01100]
gab_M00169  CAM (Crassulacean acid metabolism), light [PATH:gab01100]
gab_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:gab01100]
gab_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:gab01100]
gab_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:gab01100]
gab_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:gab01100]
gab_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gab01100]
gab_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:gab01100]
gab_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:gab01100]
gab_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:gab01100]
gab_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:gab01100]
gab_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:gab01100]
gab_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:gab01100]
gab_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:gab01100]
gab_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:gab01100]
gab_M00532  Photorespiration [PATH:gab01100]
gab_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:gab01100]
gab_M00555  Betaine biosynthesis, choline => betaine [PATH:gab01100]
gab_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:gab01100]
gab_M00621  Glycine cleavage system [PATH:gab01100]
gab_M00844  Arginine biosynthesis, ornithine => arginine [PATH:gab01100]
gab_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:gab01100]
gab_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:gab01100]
gab_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:gab01100]
gab_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:gab01100]
gab_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:gab01100]
gab_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:gab01100]
gab_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:gab01100]
gab_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:gab01100]
gab_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:gab01100]
gab_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:gab01100]
gab_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:gab01100]
gab_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:gab01100]
gab_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:gab01100]
gab_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:gab01100]
gab_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:gab01100]
gab_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:gab01100]
gab_M00940  Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:gab01100]
gab_M00970  Proline degradation, proline => glutamate [PATH:gab01100]
gab_M00972  Proline metabolism [PATH:gab01100]
Organism
Gossypium arboreum (tree cotton) [GN:gab]
Related
pathway
gab00010  Glycolysis / Gluconeogenesis
gab00020  Citrate cycle (TCA cycle)
gab00030  Pentose phosphate pathway
gab00040  Pentose and glucuronate interconversions
gab00051  Fructose and mannose metabolism
gab00052  Galactose metabolism
gab00053  Ascorbate and aldarate metabolism
gab00061  Fatty acid biosynthesis
gab00062  Fatty acid elongation
gab00071  Fatty acid degradation
gab00073  Cutin, suberine and wax biosynthesis
gab00100  Steroid biosynthesis
gab00130  Ubiquinone and other terpenoid-quinone biosynthesis
gab00190  Oxidative phosphorylation
gab00195  Photosynthesis
gab00196  Photosynthesis - antenna proteins
gab00220  Arginine biosynthesis
gab00230  Purine metabolism
gab00232  Caffeine metabolism
gab00240  Pyrimidine metabolism
gab00250  Alanine, aspartate and glutamate metabolism
gab00260  Glycine, serine and threonine metabolism
gab00261  Monobactam biosynthesis
gab00270  Cysteine and methionine metabolism
gab00280  Valine, leucine and isoleucine degradation
gab00290  Valine, leucine and isoleucine biosynthesis
gab00300  Lysine biosynthesis
gab00310  Lysine degradation
gab00330  Arginine and proline metabolism
gab00340  Histidine metabolism
gab00350  Tyrosine metabolism
gab00360  Phenylalanine metabolism
gab00380  Tryptophan metabolism
gab00400  Phenylalanine, tyrosine and tryptophan biosynthesis
gab00410  beta-Alanine metabolism
gab00430  Taurine and hypotaurine metabolism
gab00440  Phosphonate and phosphinate metabolism
gab00450  Selenocompound metabolism
gab00460  Cyanoamino acid metabolism
gab00470  D-Amino acid metabolism
gab00480  Glutathione metabolism
gab00500  Starch and sucrose metabolism
gab00510  N-Glycan biosynthesis
gab00511  Other glycan degradation
gab00513  Various types of N-glycan biosynthesis
gab00514  Other types of O-glycan biosynthesis
gab00520  Amino sugar and nucleotide sugar metabolism
gab00531  Glycosaminoglycan degradation
gab00543  Exopolysaccharide biosynthesis
gab00561  Glycerolipid metabolism
gab00562  Inositol phosphate metabolism
gab00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
gab00564  Glycerophospholipid metabolism
gab00565  Ether lipid metabolism
gab00590  Arachidonic acid metabolism
gab00591  Linoleic acid metabolism
gab00592  alpha-Linolenic acid metabolism
gab00600  Sphingolipid metabolism
gab00601  Glycosphingolipid biosynthesis - lacto and neolacto series
gab00603  Glycosphingolipid biosynthesis - globo and isoglobo series
gab00604  Glycosphingolipid biosynthesis - ganglio series
gab00620  Pyruvate metabolism
gab00630  Glyoxylate and dicarboxylate metabolism
gab00640  Propanoate metabolism
gab00650  Butanoate metabolism
gab00660  C5-Branched dibasic acid metabolism
gab00670  One carbon pool by folate
gab00710  Carbon fixation in photosynthetic organisms
gab00730  Thiamine metabolism
gab00740  Riboflavin metabolism
gab00750  Vitamin B6 metabolism
gab00760  Nicotinate and nicotinamide metabolism
gab00770  Pantothenate and CoA biosynthesis
gab00780  Biotin metabolism
gab00785  Lipoic acid metabolism
gab00790  Folate biosynthesis
gab00860  Porphyrin metabolism
gab00900  Terpenoid backbone biosynthesis
gab00902  Monoterpenoid biosynthesis
gab00904  Diterpenoid biosynthesis
gab00905  Brassinosteroid biosynthesis
gab00906  Carotenoid biosynthesis
gab00908  Zeatin biosynthesis
gab00909  Sesquiterpenoid and triterpenoid biosynthesis
gab00910  Nitrogen metabolism
gab00920  Sulfur metabolism
gab00940  Phenylpropanoid biosynthesis
gab00941  Flavonoid biosynthesis
gab00942  Anthocyanin biosynthesis
gab00943  Isoflavonoid biosynthesis
gab00944  Flavone and flavonol biosynthesis
gab00950  Isoquinoline alkaloid biosynthesis
gab00960  Tropane, piperidine and pyridine alkaloid biosynthesis
gab00965  Betalain biosynthesis
gab00966  Glucosinolate biosynthesis
gab00999  Biosynthesis of various plant secondary metabolites
gab01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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