PATHWAY: gam01100 Help Entry gam01100                    Pathway                                 Name Metabolic pathways - Gordonia amarae Class BRITE hierarchy Pathway map gam01100   Metabolic pathways Module gam_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gam01100] gam_M00002   Glycolysis, core module involving three-carbon compounds [PATH:gam01100] gam_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gam01100] gam_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:gam01100] gam_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:gam01100] gam_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:gam01100] gam_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gam01100] gam_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:gam01100] gam_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:gam01100] gam_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:gam01100] gam_M00015   Proline biosynthesis, glutamate => proline [PATH:gam01100] gam_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:gam01100] gam_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:gam01100] gam_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:gam01100] gam_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:gam01100] gam_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:gam01100] gam_M00026   Histidine biosynthesis, PRPP => histidine [PATH:gam01100] gam_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:gam01100] gam_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:gam01100] gam_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:gam01100] gam_M00035   Methionine degradation [PATH:gam01100] gam_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gam01100] gam_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gam01100] gam_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gam01100] gam_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gam01100] gam_M00082   Fatty acid biosynthesis, initiation [PATH:gam01100] gam_M00083   Fatty acid biosynthesis, elongation [PATH:gam01100] gam_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:gam01100] gam_M00087   beta-Oxidation [PATH:gam01100] gam_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:gam01100] gam_M00098   Acylglycerol degradation [PATH:gam01100] gam_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:gam01100] gam_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:gam01100] gam_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:gam01100] gam_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:gam01100] gam_M00149   Succinate dehydrogenase, prokaryotes [PATH:gam01100] gam_M00151   Cytochrome bc1 complex respiratory unit [PATH:gam01100] gam_M00155   Cytochrome c oxidase, prokaryotes [PATH:gam01100] gam_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:gam01100] gam_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gam01100] gam_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:gam01100] gam_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:gam01100] gam_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:gam01100] gam_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:gam01100] gam_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:gam01100] gam_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:gam01100] gam_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:gam01100] gam_M00621   Glycine cleavage system [PATH:gam01100] gam_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:gam01100] gam_M00793   dTDP-L-rhamnose biosynthesis [PATH:gam01100] gam_M00844   Arginine biosynthesis, ornithine => arginine [PATH:gam01100] gam_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:gam01100] gam_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:gam01100] gam_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:gam01100] gam_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:gam01100] gam_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:gam01100] gam_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:gam01100] gam_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:gam01100] gam_M00970   Proline degradation, proline => glutamate [PATH:gam01100] gam_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:gam01100] Organism Gordonia amarae [GN:gam] Related pathway gam00010   Glycolysis / Gluconeogenesis gam00020   Citrate cycle (TCA cycle) gam00030   Pentose phosphate pathway gam00040   Pentose and glucuronate interconversions gam00051   Fructose and mannose metabolism gam00052   Galactose metabolism gam00053   Ascorbate and aldarate metabolism gam00061   Fatty acid biosynthesis gam00062   Fatty acid elongation gam00071   Fatty acid degradation gam00100   Steroid biosynthesis gam00130   Ubiquinone and other terpenoid-quinone biosynthesis gam00190   Oxidative phosphorylation gam00220   Arginine biosynthesis gam00230   Purine metabolism gam00232   Caffeine metabolism gam00240   Pyrimidine metabolism gam00250   Alanine, aspartate and glutamate metabolism gam00260   Glycine, serine and threonine metabolism gam00261   Monobactam biosynthesis gam00270   Cysteine and methionine metabolism gam00280   Valine, leucine and isoleucine degradation gam00290   Valine, leucine and isoleucine biosynthesis gam00300   Lysine biosynthesis gam00310   Lysine degradation gam00330   Arginine and proline metabolism gam00332   Carbapenem biosynthesis gam00340   Histidine metabolism gam00350   Tyrosine metabolism gam00360   Phenylalanine metabolism gam00361   Chlorocyclohexane and chlorobenzene degradation gam00362   Benzoate degradation gam00364   Fluorobenzoate degradation gam00380   Tryptophan metabolism gam00400   Phenylalanine, tyrosine and tryptophan biosynthesis gam00401   Novobiocin biosynthesis gam00410   beta-Alanine metabolism gam00430   Taurine and hypotaurine metabolism gam00450   Selenocompound metabolism gam00460   Cyanoamino acid metabolism gam00470   D-Amino acid metabolism gam00480   Glutathione metabolism gam00500   Starch and sucrose metabolism gam00511   Other glycan degradation gam00514   Other types of O-glycan biosynthesis gam00515   Mannose type O-glycan biosynthesis gam00520   Amino sugar and nucleotide sugar metabolism gam00521   Streptomycin biosynthesis gam00523   Polyketide sugar unit biosynthesis gam00525   Acarbose and validamycin biosynthesis gam00541   O-Antigen nucleotide sugar biosynthesis gam00542   O-Antigen repeat unit biosynthesis gam00543   Exopolysaccharide biosynthesis gam00550   Peptidoglycan biosynthesis gam00552   Teichoic acid biosynthesis gam00561   Glycerolipid metabolism gam00562   Inositol phosphate metabolism gam00564   Glycerophospholipid metabolism gam00592   alpha-Linolenic acid metabolism gam00600   Sphingolipid metabolism gam00620   Pyruvate metabolism gam00621   Dioxin degradation gam00622   Xylene degradation gam00623   Toluene degradation gam00625   Chloroalkane and chloroalkene degradation gam00626   Naphthalene degradation gam00627   Aminobenzoate degradation gam00630   Glyoxylate and dicarboxylate metabolism gam00640   Propanoate metabolism gam00643   Styrene degradation gam00650   Butanoate metabolism gam00660   C5-Branched dibasic acid metabolism gam00670   One carbon pool by folate gam00680   Methane metabolism gam00710   Carbon fixation by Calvin cycle gam00720   Other carbon fixation pathways gam00730   Thiamine metabolism gam00740   Riboflavin metabolism gam00750   Vitamin B6 metabolism gam00760   Nicotinate and nicotinamide metabolism gam00770   Pantothenate and CoA biosynthesis gam00780   Biotin metabolism gam00785   Lipoic acid metabolism gam00790   Folate biosynthesis gam00791   Atrazine degradation gam00860   Porphyrin metabolism gam00900   Terpenoid backbone biosynthesis gam00903   Limonene degradation gam00906   Carotenoid biosynthesis gam00907   Pinene, camphor and geraniol degradation gam00910   Nitrogen metabolism gam00920   Sulfur metabolism gam00930   Caprolactam degradation gam00946   Degradation of flavonoids gam00984   Steroid degradation gam00997   Biosynthesis of various other secondary metabolites gam00999   Biosynthesis of various plant secondary metabolites gam01040   Biosynthesis of unsaturated fatty acids gam01053   Biosynthesis of siderophore group nonribosomal peptides gam01057   Biosynthesis of type II polyketide products KO pathway ko01100     LinkDB All DBs

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