PATHWAY: geb01100 Help Entry geb01100                    Pathway                                 Name Metabolic pathways - Geobacter sp. M18 Class BRITE hierarchy Pathway map geb01100   Metabolic pathways Module geb_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:geb01100] geb_M00002   Glycolysis, core module involving three-carbon compounds [PATH:geb01100] geb_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:geb01100] geb_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:geb01100] geb_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:geb01100] geb_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:geb01100] geb_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:geb01100] geb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:geb01100] geb_M00015   Proline biosynthesis, glutamate => proline [PATH:geb01100] geb_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:geb01100] geb_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:geb01100] geb_M00021   Cysteine biosynthesis, serine => cysteine [PATH:geb01100] geb_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:geb01100] geb_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:geb01100] geb_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:geb01100] geb_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:geb01100] geb_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:geb01100] geb_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:geb01100] geb_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:geb01100] geb_M00063   CMP-KDO biosynthesis [PATH:geb01100] geb_M00082   Fatty acid biosynthesis, initiation [PATH:geb01100] geb_M00083   Fatty acid biosynthesis, elongation [PATH:geb01100] geb_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:geb01100] geb_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:geb01100] geb_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:geb01100] geb_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:geb01100] geb_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:geb01100] geb_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:geb01100] geb_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:geb01100] geb_M00155   Cytochrome c oxidase, prokaryotes [PATH:geb01100] geb_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:geb01100] geb_M00169   CAM (Crassulacean acid metabolism), light [PATH:geb01100] geb_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:geb01100] geb_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:geb01100] geb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:geb01100] geb_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:geb01100] geb_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:geb01100] geb_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:geb01100] geb_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:geb01100] geb_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:geb01100] geb_M00621   Glycine cleavage system [PATH:geb01100] geb_M00793   dTDP-L-rhamnose biosynthesis [PATH:geb01100] geb_M00844   Arginine biosynthesis, ornithine => arginine [PATH:geb01100] geb_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:geb01100] geb_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:geb01100] geb_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:geb01100] geb_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:geb01100] geb_M00930   Menaquinone biosynthesis, futalosine pathway [PATH:geb01100] geb_M00970   Proline degradation, proline => glutamate [PATH:geb01100] Organism Geobacter sp. M18 [GN:geb] Related pathway geb00010   Glycolysis / Gluconeogenesis geb00020   Citrate cycle (TCA cycle) geb00030   Pentose phosphate pathway geb00040   Pentose and glucuronate interconversions geb00051   Fructose and mannose metabolism geb00052   Galactose metabolism geb00053   Ascorbate and aldarate metabolism geb00061   Fatty acid biosynthesis geb00071   Fatty acid degradation geb00130   Ubiquinone and other terpenoid-quinone biosynthesis geb00190   Oxidative phosphorylation geb00220   Arginine biosynthesis geb00230   Purine metabolism geb00240   Pyrimidine metabolism geb00250   Alanine, aspartate and glutamate metabolism geb00260   Glycine, serine and threonine metabolism geb00261   Monobactam biosynthesis geb00270   Cysteine and methionine metabolism geb00280   Valine, leucine and isoleucine degradation geb00290   Valine, leucine and isoleucine biosynthesis geb00300   Lysine biosynthesis geb00310   Lysine degradation geb00330   Arginine and proline metabolism geb00332   Carbapenem biosynthesis geb00333   Prodigiosin biosynthesis geb00340   Histidine metabolism geb00350   Tyrosine metabolism geb00360   Phenylalanine metabolism geb00362   Benzoate degradation geb00380   Tryptophan metabolism geb00400   Phenylalanine, tyrosine and tryptophan biosynthesis geb00401   Novobiocin biosynthesis geb00410   beta-Alanine metabolism geb00430   Taurine and hypotaurine metabolism geb00450   Selenocompound metabolism geb00470   D-Amino acid metabolism geb00480   Glutathione metabolism geb00500   Starch and sucrose metabolism geb00514   Other types of O-glycan biosynthesis geb00515   Mannose type O-glycan biosynthesis geb00520   Amino sugar and nucleotide sugar metabolism geb00521   Streptomycin biosynthesis geb00523   Polyketide sugar unit biosynthesis geb00525   Acarbose and validamycin biosynthesis geb00540   Lipopolysaccharide biosynthesis geb00541   O-Antigen nucleotide sugar biosynthesis geb00542   O-Antigen repeat unit biosynthesis geb00543   Exopolysaccharide biosynthesis geb00550   Peptidoglycan biosynthesis geb00552   Teichoic acid biosynthesis geb00561   Glycerolipid metabolism geb00562   Inositol phosphate metabolism geb00564   Glycerophospholipid metabolism geb00592   alpha-Linolenic acid metabolism geb00620   Pyruvate metabolism geb00625   Chloroalkane and chloroalkene degradation geb00626   Naphthalene degradation geb00627   Aminobenzoate degradation geb00630   Glyoxylate and dicarboxylate metabolism geb00640   Propanoate metabolism geb00650   Butanoate metabolism geb00660   C5-Branched dibasic acid metabolism geb00670   One carbon pool by folate geb00680   Methane metabolism geb00710   Carbon fixation by Calvin cycle geb00720   Other carbon fixation pathways geb00730   Thiamine metabolism geb00740   Riboflavin metabolism geb00750   Vitamin B6 metabolism geb00760   Nicotinate and nicotinamide metabolism geb00770   Pantothenate and CoA biosynthesis geb00780   Biotin metabolism geb00785   Lipoic acid metabolism geb00790   Folate biosynthesis geb00860   Porphyrin metabolism geb00900   Terpenoid backbone biosynthesis geb00903   Limonene degradation geb00907   Pinene, camphor and geraniol degradation geb00909   Sesquiterpenoid and triterpenoid biosynthesis geb00910   Nitrogen metabolism geb00920   Sulfur metabolism geb00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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