PATHWAY: gep01100 Help Entry gep01100                    Pathway                                 Name Metabolic pathways - Geothrix sp. PMB-07 Class BRITE hierarchy Pathway map gep01100   Metabolic pathways Module gep_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gep01100] gep_M00002   Glycolysis, core module involving three-carbon compounds [PATH:gep01100] gep_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gep01100] gep_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:gep01100] gep_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gep01100] gep_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:gep01100] gep_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:gep01100] gep_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:gep01100] gep_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:gep01100] gep_M00012   Glyoxylate cycle [PATH:gep01100] gep_M00015   Proline biosynthesis, glutamate => proline [PATH:gep01100] gep_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:gep01100] gep_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:gep01100] gep_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:gep01100] gep_M00021   Cysteine biosynthesis, serine => cysteine [PATH:gep01100] gep_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:gep01100] gep_M00035   Methionine degradation [PATH:gep01100] gep_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:gep01100] gep_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gep01100] gep_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gep01100] gep_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gep01100] gep_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gep01100] gep_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gep01100] gep_M00063   CMP-KDO biosynthesis [PATH:gep01100] gep_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:gep01100] gep_M00082   Fatty acid biosynthesis, initiation [PATH:gep01100] gep_M00083   Fatty acid biosynthesis, elongation [PATH:gep01100] gep_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:gep01100] gep_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:gep01100] gep_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:gep01100] gep_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:gep01100] gep_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:gep01100] gep_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:gep01100] gep_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:gep01100] gep_M00155   Cytochrome c oxidase, prokaryotes [PATH:gep01100] gep_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:gep01100] gep_M00168   CAM (Crassulacean acid metabolism), dark [PATH:gep01100] gep_M00169   CAM (Crassulacean acid metabolism), light [PATH:gep01100] gep_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gep01100] gep_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:gep01100] gep_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:gep01100] gep_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:gep01100] gep_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:gep01100] gep_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:gep01100] gep_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:gep01100] gep_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:gep01100] gep_M00621   Glycine cleavage system [PATH:gep01100] gep_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:gep01100] gep_M00793   dTDP-L-rhamnose biosynthesis [PATH:gep01100] gep_M00844   Arginine biosynthesis, ornithine => arginine [PATH:gep01100] gep_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:gep01100] gep_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:gep01100] gep_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:gep01100] gep_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:gep01100] gep_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:gep01100] gep_M00970   Proline degradation, proline => glutamate [PATH:gep01100] gep_M00972   Proline metabolism [PATH:gep01100] Organism Geothrix sp. PMB-07 [GN:gep] Related pathway gep00010   Glycolysis / Gluconeogenesis gep00020   Citrate cycle (TCA cycle) gep00030   Pentose phosphate pathway gep00040   Pentose and glucuronate interconversions gep00051   Fructose and mannose metabolism gep00052   Galactose metabolism gep00053   Ascorbate and aldarate metabolism gep00061   Fatty acid biosynthesis gep00071   Fatty acid degradation gep00074   Mycolic acid biosynthesis gep00130   Ubiquinone and other terpenoid-quinone biosynthesis gep00190   Oxidative phosphorylation gep00220   Arginine biosynthesis gep00230   Purine metabolism gep00240   Pyrimidine metabolism gep00250   Alanine, aspartate and glutamate metabolism gep00260   Glycine, serine and threonine metabolism gep00261   Monobactam biosynthesis gep00270   Cysteine and methionine metabolism gep00280   Valine, leucine and isoleucine degradation gep00290   Valine, leucine and isoleucine biosynthesis gep00300   Lysine biosynthesis gep00310   Lysine degradation gep00330   Arginine and proline metabolism gep00332   Carbapenem biosynthesis gep00340   Histidine metabolism gep00350   Tyrosine metabolism gep00360   Phenylalanine metabolism gep00362   Benzoate degradation gep00380   Tryptophan metabolism gep00400   Phenylalanine, tyrosine and tryptophan biosynthesis gep00401   Novobiocin biosynthesis gep00410   beta-Alanine metabolism gep00430   Taurine and hypotaurine metabolism gep00450   Selenocompound metabolism gep00460   Cyanoamino acid metabolism gep00470   D-Amino acid metabolism gep00480   Glutathione metabolism gep00500   Starch and sucrose metabolism gep00511   Other glycan degradation gep00520   Amino sugar and nucleotide sugar metabolism gep00521   Streptomycin biosynthesis gep00523   Polyketide sugar unit biosynthesis gep00525   Acarbose and validamycin biosynthesis gep00540   Lipopolysaccharide biosynthesis gep00541   O-Antigen nucleotide sugar biosynthesis gep00542   O-Antigen repeat unit biosynthesis gep00543   Exopolysaccharide biosynthesis gep00550   Peptidoglycan biosynthesis gep00552   Teichoic acid biosynthesis gep00561   Glycerolipid metabolism gep00562   Inositol phosphate metabolism gep00564   Glycerophospholipid metabolism gep00592   alpha-Linolenic acid metabolism gep00600   Sphingolipid metabolism gep00620   Pyruvate metabolism gep00625   Chloroalkane and chloroalkene degradation gep00627   Aminobenzoate degradation gep00630   Glyoxylate and dicarboxylate metabolism gep00640   Propanoate metabolism gep00643   Styrene degradation gep00650   Butanoate metabolism gep00660   C5-Branched dibasic acid metabolism gep00670   One carbon pool by folate gep00680   Methane metabolism gep00710   Carbon fixation by Calvin cycle gep00720   Other carbon fixation pathways gep00730   Thiamine metabolism gep00740   Riboflavin metabolism gep00750   Vitamin B6 metabolism gep00760   Nicotinate and nicotinamide metabolism gep00770   Pantothenate and CoA biosynthesis gep00780   Biotin metabolism gep00785   Lipoic acid metabolism gep00790   Folate biosynthesis gep00860   Porphyrin metabolism gep00900   Terpenoid backbone biosynthesis gep00907   Pinene, camphor and geraniol degradation gep00910   Nitrogen metabolism gep00920   Sulfur metabolism gep00946   Degradation of flavonoids gep00999   Biosynthesis of various plant secondary metabolites gep01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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