PATHWAY: ger01100 Help Entry ger01100                    Pathway                                 Name Metabolic pathways - Geomonas oryzisoli Class BRITE hierarchy Pathway map ger01100   Metabolic pathways Module ger_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ger01100] ger_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ger01100] ger_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ger01100] ger_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ger01100] ger_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ger01100] ger_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ger01100] ger_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ger01100] ger_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ger01100] ger_M00015   Proline biosynthesis, glutamate => proline [PATH:ger01100] ger_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ger01100] ger_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ger01100] ger_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ger01100] ger_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ger01100] ger_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ger01100] ger_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ger01100] ger_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ger01100] ger_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ger01100] ger_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ger01100] ger_M00063   CMP-KDO biosynthesis [PATH:ger01100] ger_M00082   Fatty acid biosynthesis, initiation [PATH:ger01100] ger_M00083   Fatty acid biosynthesis, elongation [PATH:ger01100] ger_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ger01100] ger_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ger01100] ger_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ger01100] ger_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ger01100] ger_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ger01100] ger_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ger01100] ger_M00155   Cytochrome c oxidase, prokaryotes [PATH:ger01100] ger_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ger01100] ger_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ger01100] ger_M00169   CAM (Crassulacean acid metabolism), light [PATH:ger01100] ger_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:ger01100] ger_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ger01100] ger_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ger01100] ger_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:ger01100] ger_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ger01100] ger_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:ger01100] ger_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ger01100] ger_M00621   Glycine cleavage system [PATH:ger01100] ger_M00793   dTDP-L-rhamnose biosynthesis [PATH:ger01100] ger_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ger01100] ger_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ger01100] ger_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ger01100] ger_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ger01100] ger_M00930   Menaquinone biosynthesis, futalosine pathway [PATH:ger01100] ger_M00970   Proline degradation, proline => glutamate [PATH:ger01100] Organism Geomonas oryzisoli [GN:ger] Related pathway ger00010   Glycolysis / Gluconeogenesis ger00020   Citrate cycle (TCA cycle) ger00030   Pentose phosphate pathway ger00040   Pentose and glucuronate interconversions ger00051   Fructose and mannose metabolism ger00052   Galactose metabolism ger00053   Ascorbate and aldarate metabolism ger00061   Fatty acid biosynthesis ger00071   Fatty acid degradation ger00130   Ubiquinone and other terpenoid-quinone biosynthesis ger00190   Oxidative phosphorylation ger00220   Arginine biosynthesis ger00230   Purine metabolism ger00240   Pyrimidine metabolism ger00250   Alanine, aspartate and glutamate metabolism ger00260   Glycine, serine and threonine metabolism ger00261   Monobactam biosynthesis ger00270   Cysteine and methionine metabolism ger00280   Valine, leucine and isoleucine degradation ger00290   Valine, leucine and isoleucine biosynthesis ger00300   Lysine biosynthesis ger00310   Lysine degradation ger00330   Arginine and proline metabolism ger00332   Carbapenem biosynthesis ger00340   Histidine metabolism ger00350   Tyrosine metabolism ger00360   Phenylalanine metabolism ger00362   Benzoate degradation ger00380   Tryptophan metabolism ger00400   Phenylalanine, tyrosine and tryptophan biosynthesis ger00401   Novobiocin biosynthesis ger00410   beta-Alanine metabolism ger00430   Taurine and hypotaurine metabolism ger00450   Selenocompound metabolism ger00470   D-Amino acid metabolism ger00480   Glutathione metabolism ger00500   Starch and sucrose metabolism ger00514   Other types of O-glycan biosynthesis ger00515   Mannose type O-glycan biosynthesis ger00520   Amino sugar and nucleotide sugar metabolism ger00521   Streptomycin biosynthesis ger00523   Polyketide sugar unit biosynthesis ger00525   Acarbose and validamycin biosynthesis ger00540   Lipopolysaccharide biosynthesis ger00541   O-Antigen nucleotide sugar biosynthesis ger00542   O-Antigen repeat unit biosynthesis ger00543   Exopolysaccharide biosynthesis ger00550   Peptidoglycan biosynthesis ger00552   Teichoic acid biosynthesis ger00561   Glycerolipid metabolism ger00562   Inositol phosphate metabolism ger00564   Glycerophospholipid metabolism ger00592   alpha-Linolenic acid metabolism ger00620   Pyruvate metabolism ger00625   Chloroalkane and chloroalkene degradation ger00626   Naphthalene degradation ger00627   Aminobenzoate degradation ger00630   Glyoxylate and dicarboxylate metabolism ger00633   Nitrotoluene degradation ger00640   Propanoate metabolism ger00650   Butanoate metabolism ger00660   C5-Branched dibasic acid metabolism ger00670   One carbon pool by folate ger00680   Methane metabolism ger00730   Thiamine metabolism ger00740   Riboflavin metabolism ger00750   Vitamin B6 metabolism ger00760   Nicotinate and nicotinamide metabolism ger00770   Pantothenate and CoA biosynthesis ger00780   Biotin metabolism ger00785   Lipoic acid metabolism ger00790   Folate biosynthesis ger00860   Porphyrin metabolism ger00900   Terpenoid backbone biosynthesis ger00907   Pinene, camphor and geraniol degradation ger00909   Sesquiterpenoid and triterpenoid biosynthesis ger00910   Nitrogen metabolism ger00920   Sulfur metabolism ger00999   Biosynthesis of various plant secondary metabolites ger01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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