PATHWAY: gms01100 Help Entry gms01100                    Pathway                                 Name Metabolic pathways - Gemmata massiliana Class BRITE hierarchy Pathway map gms01100   Metabolic pathways Module gms_M00002   Glycolysis, core module involving three-carbon compounds [PATH:gms01100] gms_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:gms01100] gms_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:gms01100] gms_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:gms01100] gms_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gms01100] gms_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:gms01100] gms_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:gms01100] gms_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:gms01100] gms_M00015   Proline biosynthesis, glutamate => proline [PATH:gms01100] gms_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:gms01100] gms_M00021   Cysteine biosynthesis, serine => cysteine [PATH:gms01100] gms_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:gms01100] gms_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:gms01100] gms_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:gms01100] gms_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gms01100] gms_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gms01100] gms_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gms01100] gms_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gms01100] gms_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gms01100] gms_M00063   CMP-KDO biosynthesis [PATH:gms01100] gms_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:gms01100] gms_M00082   Fatty acid biosynthesis, initiation [PATH:gms01100] gms_M00083   Fatty acid biosynthesis, elongation [PATH:gms01100] gms_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:gms01100] gms_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:gms01100] gms_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:gms01100] gms_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:gms01100] gms_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:gms01100] gms_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:gms01100] gms_M00155   Cytochrome c oxidase, prokaryotes [PATH:gms01100] gms_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:gms01100] gms_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:gms01100] gms_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gms01100] gms_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:gms01100] gms_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:gms01100] gms_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:gms01100] gms_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:gms01100] gms_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:gms01100] gms_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:gms01100] gms_M00621   Glycine cleavage system [PATH:gms01100] gms_M00793   dTDP-L-rhamnose biosynthesis [PATH:gms01100] gms_M00844   Arginine biosynthesis, ornithine => arginine [PATH:gms01100] gms_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:gms01100] gms_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:gms01100] gms_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:gms01100] gms_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:gms01100] gms_M00970   Proline degradation, proline => glutamate [PATH:gms01100] Organism Gemmata massiliana [GN:gms] Related pathway gms00010   Glycolysis / Gluconeogenesis gms00020   Citrate cycle (TCA cycle) gms00030   Pentose phosphate pathway gms00040   Pentose and glucuronate interconversions gms00051   Fructose and mannose metabolism gms00052   Galactose metabolism gms00053   Ascorbate and aldarate metabolism gms00061   Fatty acid biosynthesis gms00071   Fatty acid degradation gms00130   Ubiquinone and other terpenoid-quinone biosynthesis gms00190   Oxidative phosphorylation gms00220   Arginine biosynthesis gms00230   Purine metabolism gms00240   Pyrimidine metabolism gms00250   Alanine, aspartate and glutamate metabolism gms00260   Glycine, serine and threonine metabolism gms00261   Monobactam biosynthesis gms00270   Cysteine and methionine metabolism gms00280   Valine, leucine and isoleucine degradation gms00290   Valine, leucine and isoleucine biosynthesis gms00300   Lysine biosynthesis gms00310   Lysine degradation gms00311   Penicillin and cephalosporin biosynthesis gms00330   Arginine and proline metabolism gms00332   Carbapenem biosynthesis gms00340   Histidine metabolism gms00350   Tyrosine metabolism gms00360   Phenylalanine metabolism gms00361   Chlorocyclohexane and chlorobenzene degradation gms00362   Benzoate degradation gms00364   Fluorobenzoate degradation gms00380   Tryptophan metabolism gms00400   Phenylalanine, tyrosine and tryptophan biosynthesis gms00401   Novobiocin biosynthesis gms00410   beta-Alanine metabolism gms00430   Taurine and hypotaurine metabolism gms00440   Phosphonate and phosphinate metabolism gms00450   Selenocompound metabolism gms00460   Cyanoamino acid metabolism gms00470   D-Amino acid metabolism gms00480   Glutathione metabolism gms00500   Starch and sucrose metabolism gms00511   Other glycan degradation gms00520   Amino sugar and nucleotide sugar metabolism gms00521   Streptomycin biosynthesis gms00523   Polyketide sugar unit biosynthesis gms00525   Acarbose and validamycin biosynthesis gms00540   Lipopolysaccharide biosynthesis gms00541   O-Antigen nucleotide sugar biosynthesis gms00543   Exopolysaccharide biosynthesis gms00550   Peptidoglycan biosynthesis gms00552   Teichoic acid biosynthesis gms00561   Glycerolipid metabolism gms00562   Inositol phosphate metabolism gms00564   Glycerophospholipid metabolism gms00600   Sphingolipid metabolism gms00620   Pyruvate metabolism gms00621   Dioxin degradation gms00622   Xylene degradation gms00623   Toluene degradation gms00625   Chloroalkane and chloroalkene degradation gms00626   Naphthalene degradation gms00627   Aminobenzoate degradation gms00630   Glyoxylate and dicarboxylate metabolism gms00640   Propanoate metabolism gms00643   Styrene degradation gms00650   Butanoate metabolism gms00660   C5-Branched dibasic acid metabolism gms00670   One carbon pool by folate gms00680   Methane metabolism gms00710   Carbon fixation by Calvin cycle gms00720   Other carbon fixation pathways gms00730   Thiamine metabolism gms00740   Riboflavin metabolism gms00750   Vitamin B6 metabolism gms00760   Nicotinate and nicotinamide metabolism gms00770   Pantothenate and CoA biosynthesis gms00780   Biotin metabolism gms00785   Lipoic acid metabolism gms00790   Folate biosynthesis gms00860   Porphyrin metabolism gms00900   Terpenoid backbone biosynthesis gms00906   Carotenoid biosynthesis gms00907   Pinene, camphor and geraniol degradation gms00909   Sesquiterpenoid and triterpenoid biosynthesis gms00910   Nitrogen metabolism gms00920   Sulfur metabolism gms00930   Caprolactam degradation gms00999   Biosynthesis of various plant secondary metabolites gms01040   Biosynthesis of unsaturated fatty acids gms01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system