PATHWAY: goc01100 Help Entry goc01100                    Pathway                                 Name Metabolic pathways - Gordonia sp. YC-JH1 Class BRITE hierarchy Pathway map goc01100   Metabolic pathways Module goc_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:goc01100] goc_M00002   Glycolysis, core module involving three-carbon compounds [PATH:goc01100] goc_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:goc01100] goc_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:goc01100] goc_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:goc01100] goc_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:goc01100] goc_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:goc01100] goc_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:goc01100] goc_M00015   Proline biosynthesis, glutamate => proline [PATH:goc01100] goc_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:goc01100] goc_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:goc01100] goc_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:goc01100] goc_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:goc01100] goc_M00021   Cysteine biosynthesis, serine => cysteine [PATH:goc01100] goc_M00026   Histidine biosynthesis, PRPP => histidine [PATH:goc01100] goc_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:goc01100] goc_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:goc01100] goc_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:goc01100] goc_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:goc01100] goc_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:goc01100] goc_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:goc01100] goc_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:goc01100] goc_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:goc01100] goc_M00087   beta-Oxidation [PATH:goc01100] goc_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:goc01100] goc_M00098   Acylglycerol degradation [PATH:goc01100] goc_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:goc01100] goc_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:goc01100] goc_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:goc01100] goc_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:goc01100] goc_M00149   Succinate dehydrogenase, prokaryotes [PATH:goc01100] goc_M00151   Cytochrome bc1 complex respiratory unit [PATH:goc01100] goc_M00155   Cytochrome c oxidase, prokaryotes [PATH:goc01100] goc_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:goc01100] goc_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:goc01100] goc_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:goc01100] goc_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:goc01100] goc_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:goc01100] goc_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:goc01100] goc_M00621   Glycine cleavage system [PATH:goc01100] goc_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:goc01100] goc_M00793   dTDP-L-rhamnose biosynthesis [PATH:goc01100] goc_M00844   Arginine biosynthesis, ornithine => arginine [PATH:goc01100] goc_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:goc01100] goc_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:goc01100] goc_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:goc01100] goc_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:goc01100] goc_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:goc01100] goc_M00970   Proline degradation, proline => glutamate [PATH:goc01100] Organism Gordonia sp. YC-JH1 [GN:goc] Related pathway goc00010   Glycolysis / Gluconeogenesis goc00020   Citrate cycle (TCA cycle) goc00030   Pentose phosphate pathway goc00040   Pentose and glucuronate interconversions goc00051   Fructose and mannose metabolism goc00052   Galactose metabolism goc00061   Fatty acid biosynthesis goc00071   Fatty acid degradation goc00100   Steroid biosynthesis goc00121   Secondary bile acid biosynthesis goc00130   Ubiquinone and other terpenoid-quinone biosynthesis goc00190   Oxidative phosphorylation goc00220   Arginine biosynthesis goc00230   Purine metabolism goc00240   Pyrimidine metabolism goc00250   Alanine, aspartate and glutamate metabolism goc00260   Glycine, serine and threonine metabolism goc00261   Monobactam biosynthesis goc00270   Cysteine and methionine metabolism goc00280   Valine, leucine and isoleucine degradation goc00290   Valine, leucine and isoleucine biosynthesis goc00300   Lysine biosynthesis goc00310   Lysine degradation goc00330   Arginine and proline metabolism goc00332   Carbapenem biosynthesis goc00340   Histidine metabolism goc00350   Tyrosine metabolism goc00360   Phenylalanine metabolism goc00361   Chlorocyclohexane and chlorobenzene degradation goc00362   Benzoate degradation goc00364   Fluorobenzoate degradation goc00380   Tryptophan metabolism goc00400   Phenylalanine, tyrosine and tryptophan biosynthesis goc00401   Novobiocin biosynthesis goc00410   beta-Alanine metabolism goc00430   Taurine and hypotaurine metabolism goc00450   Selenocompound metabolism goc00460   Cyanoamino acid metabolism goc00470   D-Amino acid metabolism goc00480   Glutathione metabolism goc00500   Starch and sucrose metabolism goc00514   Other types of O-glycan biosynthesis goc00515   Mannose type O-glycan biosynthesis goc00520   Amino sugar and nucleotide sugar metabolism goc00521   Streptomycin biosynthesis goc00523   Polyketide sugar unit biosynthesis goc00525   Acarbose and validamycin biosynthesis goc00541   O-Antigen nucleotide sugar biosynthesis goc00542   O-Antigen repeat unit biosynthesis goc00543   Exopolysaccharide biosynthesis goc00550   Peptidoglycan biosynthesis goc00552   Teichoic acid biosynthesis goc00561   Glycerolipid metabolism goc00562   Inositol phosphate metabolism goc00564   Glycerophospholipid metabolism goc00592   alpha-Linolenic acid metabolism goc00600   Sphingolipid metabolism goc00620   Pyruvate metabolism goc00621   Dioxin degradation goc00622   Xylene degradation goc00623   Toluene degradation goc00624   Polycyclic aromatic hydrocarbon degradation goc00625   Chloroalkane and chloroalkene degradation goc00626   Naphthalene degradation goc00627   Aminobenzoate degradation goc00630   Glyoxylate and dicarboxylate metabolism goc00640   Propanoate metabolism goc00643   Styrene degradation goc00650   Butanoate metabolism goc00660   C5-Branched dibasic acid metabolism goc00670   One carbon pool by folate goc00680   Methane metabolism goc00710   Carbon fixation by Calvin cycle goc00720   Other carbon fixation pathways goc00730   Thiamine metabolism goc00740   Riboflavin metabolism goc00750   Vitamin B6 metabolism goc00760   Nicotinate and nicotinamide metabolism goc00770   Pantothenate and CoA biosynthesis goc00780   Biotin metabolism goc00785   Lipoic acid metabolism goc00790   Folate biosynthesis goc00860   Porphyrin metabolism goc00900   Terpenoid backbone biosynthesis goc00903   Limonene degradation goc00906   Carotenoid biosynthesis goc00907   Pinene, camphor and geraniol degradation goc00910   Nitrogen metabolism goc00920   Sulfur metabolism goc00930   Caprolactam degradation goc00946   Degradation of flavonoids goc00984   Steroid degradation goc00999   Biosynthesis of various plant secondary metabolites goc01040   Biosynthesis of unsaturated fatty acids goc01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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