KEGG   PATHWAY: gpb01100
Entry
gpb01100                    Pathway                                
Name
Metabolic pathways - Gamma proteobacterium HdN1
Class
Pathway map
gpb01100  Metabolic pathways
gpb01100

Module
gpb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gpb01100]
gpb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gpb01100]
gpb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gpb01100]
gpb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gpb01100]
gpb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:gpb01100]
gpb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:gpb01100]
gpb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:gpb01100]
gpb_M00012  Glyoxylate cycle [PATH:gpb01100]
gpb_M00015  Proline biosynthesis, glutamate => proline [PATH:gpb01100]
gpb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:gpb01100]
gpb_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:gpb01100]
gpb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:gpb01100]
gpb_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:gpb01100]
gpb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:gpb01100]
gpb_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:gpb01100]
gpb_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:gpb01100]
gpb_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:gpb01100]
gpb_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:gpb01100]
gpb_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:gpb01100]
gpb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gpb01100]
gpb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gpb01100]
gpb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gpb01100]
gpb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gpb01100]
gpb_M00082  Fatty acid biosynthesis, initiation [PATH:gpb01100]
gpb_M00083  Fatty acid biosynthesis, elongation [PATH:gpb01100]
gpb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:gpb01100]
gpb_M00087  beta-Oxidation [PATH:gpb01100]
gpb_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:gpb01100]
gpb_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:gpb01100]
gpb_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:gpb01100]
gpb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:gpb01100]
gpb_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:gpb01100]
gpb_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:gpb01100]
gpb_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:gpb01100]
gpb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:gpb01100]
gpb_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:gpb01100]
gpb_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:gpb01100]
gpb_M00149  Succinate dehydrogenase, prokaryotes [PATH:gpb01100]
gpb_M00151  Cytochrome bc1 complex respiratory unit [PATH:gpb01100]
gpb_M00156  Cytochrome c oxidase, cbb3-type [PATH:gpb01100]
gpb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:gpb01100]
gpb_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:gpb01100]
gpb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gpb01100]
gpb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:gpb01100]
gpb_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:gpb01100]
gpb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:gpb01100]
gpb_M00529  Denitrification, nitrate => nitrogen [PATH:gpb01100]
gpb_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:gpb01100]
gpb_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:gpb01100]
gpb_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:gpb01100]
gpb_M00621  Glycine cleavage system [PATH:gpb01100]
gpb_M00793  dTDP-L-rhamnose biosynthesis [PATH:gpb01100]
gpb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:gpb01100]
gpb_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:gpb01100]
gpb_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:gpb01100]
gpb_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:gpb01100]
gpb_M00970  Proline degradation, proline => glutamate [PATH:gpb01100]
Organism
Gamma proteobacterium HdN1 [GN:gpb]
Related
pathway
gpb00010  Glycolysis / Gluconeogenesis
gpb00020  Citrate cycle (TCA cycle)
gpb00030  Pentose phosphate pathway
gpb00040  Pentose and glucuronate interconversions
gpb00051  Fructose and mannose metabolism
gpb00052  Galactose metabolism
gpb00053  Ascorbate and aldarate metabolism
gpb00061  Fatty acid biosynthesis
gpb00071  Fatty acid degradation
gpb00100  Steroid biosynthesis
gpb00130  Ubiquinone and other terpenoid-quinone biosynthesis
gpb00190  Oxidative phosphorylation
gpb00220  Arginine biosynthesis
gpb00230  Purine metabolism
gpb00240  Pyrimidine metabolism
gpb00250  Alanine, aspartate and glutamate metabolism
gpb00260  Glycine, serine and threonine metabolism
gpb00261  Monobactam biosynthesis
gpb00270  Cysteine and methionine metabolism
gpb00280  Valine, leucine and isoleucine degradation
gpb00290  Valine, leucine and isoleucine biosynthesis
gpb00300  Lysine biosynthesis
gpb00310  Lysine degradation
gpb00330  Arginine and proline metabolism
gpb00332  Carbapenem biosynthesis
gpb00340  Histidine metabolism
gpb00350  Tyrosine metabolism
gpb00360  Phenylalanine metabolism
gpb00362  Benzoate degradation
gpb00380  Tryptophan metabolism
gpb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
gpb00401  Novobiocin biosynthesis
gpb00410  beta-Alanine metabolism
gpb00430  Taurine and hypotaurine metabolism
gpb00450  Selenocompound metabolism
gpb00460  Cyanoamino acid metabolism
gpb00470  D-Amino acid metabolism
gpb00480  Glutathione metabolism
gpb00500  Starch and sucrose metabolism
gpb00520  Amino sugar and nucleotide sugar metabolism
gpb00521  Streptomycin biosynthesis
gpb00523  Polyketide sugar unit biosynthesis
gpb00525  Acarbose and validamycin biosynthesis
gpb00540  Lipopolysaccharide biosynthesis
gpb00541  O-Antigen nucleotide sugar biosynthesis
gpb00542  O-Antigen repeat unit biosynthesis
gpb00543  Exopolysaccharide biosynthesis
gpb00550  Peptidoglycan biosynthesis
gpb00552  Teichoic acid biosynthesis
gpb00561  Glycerolipid metabolism
gpb00562  Inositol phosphate metabolism
gpb00564  Glycerophospholipid metabolism
gpb00565  Ether lipid metabolism
gpb00592  alpha-Linolenic acid metabolism
gpb00600  Sphingolipid metabolism
gpb00620  Pyruvate metabolism
gpb00621  Dioxin degradation
gpb00622  Xylene degradation
gpb00625  Chloroalkane and chloroalkene degradation
gpb00626  Naphthalene degradation
gpb00627  Aminobenzoate degradation
gpb00630  Glyoxylate and dicarboxylate metabolism
gpb00640  Propanoate metabolism
gpb00643  Styrene degradation
gpb00650  Butanoate metabolism
gpb00660  C5-Branched dibasic acid metabolism
gpb00670  One carbon pool by folate
gpb00680  Methane metabolism
gpb00710  Carbon fixation by Calvin cycle
gpb00720  Other carbon fixation pathways
gpb00730  Thiamine metabolism
gpb00740  Riboflavin metabolism
gpb00750  Vitamin B6 metabolism
gpb00760  Nicotinate and nicotinamide metabolism
gpb00770  Pantothenate and CoA biosynthesis
gpb00780  Biotin metabolism
gpb00785  Lipoic acid metabolism
gpb00790  Folate biosynthesis
gpb00860  Porphyrin metabolism
gpb00900  Terpenoid backbone biosynthesis
gpb00903  Limonene degradation
gpb00907  Pinene, camphor and geraniol degradation
gpb00910  Nitrogen metabolism
gpb00920  Sulfur metabolism
gpb00930  Caprolactam degradation
gpb00984  Steroid degradation
gpb00999  Biosynthesis of various plant secondary metabolites
gpb01040  Biosynthesis of unsaturated fatty acids
gpb01055  Biosynthesis of vancomycin group antibiotics
KO pathway
ko01100   
LinkDB

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