KEGG   PATHWAY: hdt01100
Entry
hdt01100                    Pathway                                
Name
Metabolic pathways - Hyphomicrobium denitrificans 1NES1
Class
Pathway map
hdt01100  Metabolic pathways
hdt01100

Module
hdt_M00002  Glycolysis, core module involving three-carbon compounds [PATH:hdt01100]
hdt_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:hdt01100]
hdt_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:hdt01100]
hdt_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:hdt01100]
hdt_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:hdt01100]
hdt_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:hdt01100]
hdt_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:hdt01100]
hdt_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:hdt01100]
hdt_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:hdt01100]
hdt_M00015  Proline biosynthesis, glutamate => proline [PATH:hdt01100]
hdt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:hdt01100]
hdt_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:hdt01100]
hdt_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:hdt01100]
hdt_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:hdt01100]
hdt_M00021  Cysteine biosynthesis, serine => cysteine [PATH:hdt01100]
hdt_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:hdt01100]
hdt_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:hdt01100]
hdt_M00026  Histidine biosynthesis, PRPP => histidine [PATH:hdt01100]
hdt_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:hdt01100]
hdt_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:hdt01100]
hdt_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:hdt01100]
hdt_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:hdt01100]
hdt_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:hdt01100]
hdt_M00082  Fatty acid biosynthesis, initiation [PATH:hdt01100]
hdt_M00083  Fatty acid biosynthesis, elongation [PATH:hdt01100]
hdt_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:hdt01100]
hdt_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:hdt01100]
hdt_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:hdt01100]
hdt_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:hdt01100]
hdt_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:hdt01100]
hdt_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:hdt01100]
hdt_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:hdt01100]
hdt_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:hdt01100]
hdt_M00140  C1-unit interconversion, prokaryotes [PATH:hdt01100]
hdt_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:hdt01100]
hdt_M00149  Succinate dehydrogenase, prokaryotes [PATH:hdt01100]
hdt_M00151  Cytochrome bc1 complex respiratory unit [PATH:hdt01100]
hdt_M00155  Cytochrome c oxidase, prokaryotes [PATH:hdt01100]
hdt_M00156  Cytochrome c oxidase, cbb3-type [PATH:hdt01100]
hdt_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:hdt01100]
hdt_M00168  CAM (Crassulacean acid metabolism), dark [PATH:hdt01100]
hdt_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:hdt01100]
hdt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hdt01100]
hdt_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:hdt01100]
hdt_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:hdt01100]
hdt_M00529  Denitrification, nitrate => nitrogen [PATH:hdt01100]
hdt_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:hdt01100]
hdt_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:hdt01100]
hdt_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:hdt01100]
hdt_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:hdt01100]
hdt_M00621  Glycine cleavage system [PATH:hdt01100]
hdt_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:hdt01100]
hdt_M00844  Arginine biosynthesis, ornithine => arginine [PATH:hdt01100]
hdt_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:hdt01100]
hdt_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:hdt01100]
hdt_M00970  Proline degradation, proline => glutamate [PATH:hdt01100]
Organism
Hyphomicrobium denitrificans 1NES1 [GN:hdt]
Related
pathway
hdt00010  Glycolysis / Gluconeogenesis
hdt00020  Citrate cycle (TCA cycle)
hdt00030  Pentose phosphate pathway
hdt00040  Pentose and glucuronate interconversions
hdt00051  Fructose and mannose metabolism
hdt00052  Galactose metabolism
hdt00053  Ascorbate and aldarate metabolism
hdt00061  Fatty acid biosynthesis
hdt00071  Fatty acid degradation
hdt00130  Ubiquinone and other terpenoid-quinone biosynthesis
hdt00190  Oxidative phosphorylation
hdt00220  Arginine biosynthesis
hdt00230  Purine metabolism
hdt00240  Pyrimidine metabolism
hdt00250  Alanine, aspartate and glutamate metabolism
hdt00260  Glycine, serine and threonine metabolism
hdt00261  Monobactam biosynthesis
hdt00270  Cysteine and methionine metabolism
hdt00280  Valine, leucine and isoleucine degradation
hdt00290  Valine, leucine and isoleucine biosynthesis
hdt00300  Lysine biosynthesis
hdt00310  Lysine degradation
hdt00330  Arginine and proline metabolism
hdt00332  Carbapenem biosynthesis
hdt00340  Histidine metabolism
hdt00350  Tyrosine metabolism
hdt00360  Phenylalanine metabolism
hdt00361  Chlorocyclohexane and chlorobenzene degradation
hdt00362  Benzoate degradation
hdt00364  Fluorobenzoate degradation
hdt00380  Tryptophan metabolism
hdt00400  Phenylalanine, tyrosine and tryptophan biosynthesis
hdt00401  Novobiocin biosynthesis
hdt00405  Phenazine biosynthesis
hdt00410  beta-Alanine metabolism
hdt00430  Taurine and hypotaurine metabolism
hdt00450  Selenocompound metabolism
hdt00460  Cyanoamino acid metabolism
hdt00470  D-Amino acid metabolism
hdt00480  Glutathione metabolism
hdt00500  Starch and sucrose metabolism
hdt00520  Amino sugar and nucleotide sugar metabolism
hdt00521  Streptomycin biosynthesis
hdt00523  Polyketide sugar unit biosynthesis
hdt00525  Acarbose and validamycin biosynthesis
hdt00540  Lipopolysaccharide biosynthesis
hdt00541  O-Antigen nucleotide sugar biosynthesis
hdt00543  Exopolysaccharide biosynthesis
hdt00550  Peptidoglycan biosynthesis
hdt00552  Teichoic acid biosynthesis
hdt00561  Glycerolipid metabolism
hdt00562  Inositol phosphate metabolism
hdt00564  Glycerophospholipid metabolism
hdt00620  Pyruvate metabolism
hdt00623  Toluene degradation
hdt00625  Chloroalkane and chloroalkene degradation
hdt00626  Naphthalene degradation
hdt00630  Glyoxylate and dicarboxylate metabolism
hdt00640  Propanoate metabolism
hdt00650  Butanoate metabolism
hdt00660  C5-Branched dibasic acid metabolism
hdt00670  One carbon pool by folate
hdt00680  Methane metabolism
hdt00710  Carbon fixation by Calvin cycle
hdt00720  Other carbon fixation pathways
hdt00730  Thiamine metabolism
hdt00740  Riboflavin metabolism
hdt00750  Vitamin B6 metabolism
hdt00760  Nicotinate and nicotinamide metabolism
hdt00770  Pantothenate and CoA biosynthesis
hdt00780  Biotin metabolism
hdt00785  Lipoic acid metabolism
hdt00790  Folate biosynthesis
hdt00860  Porphyrin metabolism
hdt00900  Terpenoid backbone biosynthesis
hdt00906  Carotenoid biosynthesis
hdt00907  Pinene, camphor and geraniol degradation
hdt00909  Sesquiterpenoid and triterpenoid biosynthesis
hdt00910  Nitrogen metabolism
hdt00920  Sulfur metabolism
hdt00930  Caprolactam degradation
hdt00999  Biosynthesis of various plant secondary metabolites
hdt01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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