KEGG   PATHWAY: hmc01100
Entry
hmc01100                    Pathway                                
Name
Metabolic pathways - Hyphomicrobium sp. MC1
Class
Pathway map
hmc01100  Metabolic pathways
hmc01100

Module
hmc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:hmc01100]
hmc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:hmc01100]
hmc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:hmc01100]
hmc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:hmc01100]
hmc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:hmc01100]
hmc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:hmc01100]
hmc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:hmc01100]
hmc_M00015  Proline biosynthesis, glutamate => proline [PATH:hmc01100]
hmc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:hmc01100]
hmc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:hmc01100]
hmc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:hmc01100]
hmc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:hmc01100]
hmc_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:hmc01100]
hmc_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:hmc01100]
hmc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:hmc01100]
hmc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:hmc01100]
hmc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:hmc01100]
hmc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:hmc01100]
hmc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:hmc01100]
hmc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:hmc01100]
hmc_M00082  Fatty acid biosynthesis, initiation [PATH:hmc01100]
hmc_M00083  Fatty acid biosynthesis, elongation [PATH:hmc01100]
hmc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:hmc01100]
hmc_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:hmc01100]
hmc_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:hmc01100]
hmc_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:hmc01100]
hmc_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:hmc01100]
hmc_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:hmc01100]
hmc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:hmc01100]
hmc_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:hmc01100]
hmc_M00140  C1-unit interconversion, prokaryotes [PATH:hmc01100]
hmc_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:hmc01100]
hmc_M00149  Succinate dehydrogenase, prokaryotes [PATH:hmc01100]
hmc_M00151  Cytochrome bc1 complex respiratory unit [PATH:hmc01100]
hmc_M00155  Cytochrome c oxidase, prokaryotes [PATH:hmc01100]
hmc_M00156  Cytochrome c oxidase, cbb3-type [PATH:hmc01100]
hmc_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:hmc01100]
hmc_M00168  CAM (Crassulacean acid metabolism), dark [PATH:hmc01100]
hmc_M00169  CAM (Crassulacean acid metabolism), light [PATH:hmc01100]
hmc_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:hmc01100]
hmc_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:hmc01100]
hmc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hmc01100]
hmc_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:hmc01100]
hmc_M00417  Cytochrome o ubiquinol oxidase [PATH:hmc01100]
hmc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:hmc01100]
hmc_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:hmc01100]
hmc_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:hmc01100]
hmc_M00555  Betaine biosynthesis, choline => betaine [PATH:hmc01100]
hmc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:hmc01100]
hmc_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:hmc01100]
hmc_M00793  dTDP-L-rhamnose biosynthesis [PATH:hmc01100]
hmc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:hmc01100]
hmc_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:hmc01100]
hmc_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:hmc01100]
hmc_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:hmc01100]
hmc_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:hmc01100]
hmc_M00970  Proline degradation, proline => glutamate [PATH:hmc01100]
hmc_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:hmc01100]
Organism
Hyphomicrobium sp. MC1 [GN:hmc]
Related
pathway
hmc00010  Glycolysis / Gluconeogenesis
hmc00020  Citrate cycle (TCA cycle)
hmc00030  Pentose phosphate pathway
hmc00040  Pentose and glucuronate interconversions
hmc00051  Fructose and mannose metabolism
hmc00052  Galactose metabolism
hmc00053  Ascorbate and aldarate metabolism
hmc00061  Fatty acid biosynthesis
hmc00071  Fatty acid degradation
hmc00130  Ubiquinone and other terpenoid-quinone biosynthesis
hmc00190  Oxidative phosphorylation
hmc00220  Arginine biosynthesis
hmc00230  Purine metabolism
hmc00240  Pyrimidine metabolism
hmc00250  Alanine, aspartate and glutamate metabolism
hmc00260  Glycine, serine and threonine metabolism
hmc00261  Monobactam biosynthesis
hmc00270  Cysteine and methionine metabolism
hmc00280  Valine, leucine and isoleucine degradation
hmc00290  Valine, leucine and isoleucine biosynthesis
hmc00300  Lysine biosynthesis
hmc00310  Lysine degradation
hmc00330  Arginine and proline metabolism
hmc00332  Carbapenem biosynthesis
hmc00340  Histidine metabolism
hmc00350  Tyrosine metabolism
hmc00360  Phenylalanine metabolism
hmc00361  Chlorocyclohexane and chlorobenzene degradation
hmc00362  Benzoate degradation
hmc00364  Fluorobenzoate degradation
hmc00380  Tryptophan metabolism
hmc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
hmc00401  Novobiocin biosynthesis
hmc00405  Phenazine biosynthesis
hmc00410  beta-Alanine metabolism
hmc00430  Taurine and hypotaurine metabolism
hmc00450  Selenocompound metabolism
hmc00460  Cyanoamino acid metabolism
hmc00470  D-Amino acid metabolism
hmc00480  Glutathione metabolism
hmc00500  Starch and sucrose metabolism
hmc00520  Amino sugar and nucleotide sugar metabolism
hmc00521  Streptomycin biosynthesis
hmc00523  Polyketide sugar unit biosynthesis
hmc00525  Acarbose and validamycin biosynthesis
hmc00540  Lipopolysaccharide biosynthesis
hmc00541  O-Antigen nucleotide sugar biosynthesis
hmc00543  Exopolysaccharide biosynthesis
hmc00550  Peptidoglycan biosynthesis
hmc00552  Teichoic acid biosynthesis
hmc00561  Glycerolipid metabolism
hmc00562  Inositol phosphate metabolism
hmc00564  Glycerophospholipid metabolism
hmc00620  Pyruvate metabolism
hmc00622  Xylene degradation
hmc00623  Toluene degradation
hmc00624  Polycyclic aromatic hydrocarbon degradation
hmc00625  Chloroalkane and chloroalkene degradation
hmc00626  Naphthalene degradation
hmc00627  Aminobenzoate degradation
hmc00630  Glyoxylate and dicarboxylate metabolism
hmc00633  Nitrotoluene degradation
hmc00640  Propanoate metabolism
hmc00642  Ethylbenzene degradation
hmc00643  Styrene degradation
hmc00650  Butanoate metabolism
hmc00660  C5-Branched dibasic acid metabolism
hmc00670  One carbon pool by folate
hmc00680  Methane metabolism
hmc00710  Carbon fixation by Calvin cycle
hmc00720  Other carbon fixation pathways
hmc00730  Thiamine metabolism
hmc00740  Riboflavin metabolism
hmc00750  Vitamin B6 metabolism
hmc00760  Nicotinate and nicotinamide metabolism
hmc00770  Pantothenate and CoA biosynthesis
hmc00780  Biotin metabolism
hmc00785  Lipoic acid metabolism
hmc00790  Folate biosynthesis
hmc00791  Atrazine degradation
hmc00860  Porphyrin metabolism
hmc00900  Terpenoid backbone biosynthesis
hmc00903  Limonene degradation
hmc00906  Carotenoid biosynthesis
hmc00907  Pinene, camphor and geraniol degradation
hmc00909  Sesquiterpenoid and triterpenoid biosynthesis
hmc00910  Nitrogen metabolism
hmc00920  Sulfur metabolism
hmc00930  Caprolactam degradation
hmc00999  Biosynthesis of various plant secondary metabolites
hmc01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system