KEGG   PATHWAY: hse01100
Entry
hse01100                    Pathway                                
Name
Metabolic pathways - Herbaspirillum seropedicae SmR1
Class
Pathway map
hse01100  Metabolic pathways
hse01100

Module
hse_M00002  Glycolysis, core module involving three-carbon compounds [PATH:hse01100]
hse_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:hse01100]
hse_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:hse01100]
hse_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:hse01100]
hse_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:hse01100]
hse_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:hse01100]
hse_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:hse01100]
hse_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:hse01100]
hse_M00012  Glyoxylate cycle [PATH:hse01100]
hse_M00015  Proline biosynthesis, glutamate => proline [PATH:hse01100]
hse_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:hse01100]
hse_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:hse01100]
hse_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:hse01100]
hse_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:hse01100]
hse_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:hse01100]
hse_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:hse01100]
hse_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:hse01100]
hse_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:hse01100]
hse_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:hse01100]
hse_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:hse01100]
hse_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:hse01100]
hse_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:hse01100]
hse_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:hse01100]
hse_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:hse01100]
hse_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:hse01100]
hse_M00063  CMP-KDO biosynthesis [PATH:hse01100]
hse_M00082  Fatty acid biosynthesis, initiation [PATH:hse01100]
hse_M00083  Fatty acid biosynthesis, elongation [PATH:hse01100]
hse_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:hse01100]
hse_M00087  beta-Oxidation [PATH:hse01100]
hse_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:hse01100]
hse_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:hse01100]
hse_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:hse01100]
hse_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:hse01100]
hse_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:hse01100]
hse_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:hse01100]
hse_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:hse01100]
hse_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:hse01100]
hse_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:hse01100]
hse_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:hse01100]
hse_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:hse01100]
hse_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:hse01100]
hse_M00151  Cytochrome bc1 complex respiratory unit [PATH:hse01100]
hse_M00155  Cytochrome c oxidase, prokaryotes [PATH:hse01100]
hse_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:hse01100]
hse_M00168  CAM (Crassulacean acid metabolism), dark [PATH:hse01100]
hse_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:hse01100]
hse_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:hse01100]
hse_M00417  Cytochrome o ubiquinol oxidase [PATH:hse01100]
hse_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:hse01100]
hse_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:hse01100]
hse_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:hse01100]
hse_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:hse01100]
hse_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:hse01100]
hse_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:hse01100]
hse_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:hse01100]
hse_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:hse01100]
hse_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:hse01100]
hse_M00844  Arginine biosynthesis, ornithine => arginine [PATH:hse01100]
hse_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:hse01100]
hse_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:hse01100]
hse_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:hse01100]
hse_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:hse01100]
hse_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:hse01100]
hse_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:hse01100]
hse_M00970  Proline degradation, proline => glutamate [PATH:hse01100]
Organism
Herbaspirillum seropedicae SmR1 [GN:hse]
Related
pathway
hse00010  Glycolysis / Gluconeogenesis
hse00020  Citrate cycle (TCA cycle)
hse00030  Pentose phosphate pathway
hse00040  Pentose and glucuronate interconversions
hse00051  Fructose and mannose metabolism
hse00052  Galactose metabolism
hse00053  Ascorbate and aldarate metabolism
hse00061  Fatty acid biosynthesis
hse00071  Fatty acid degradation
hse00130  Ubiquinone and other terpenoid-quinone biosynthesis
hse00190  Oxidative phosphorylation
hse00220  Arginine biosynthesis
hse00230  Purine metabolism
hse00240  Pyrimidine metabolism
hse00250  Alanine, aspartate and glutamate metabolism
hse00260  Glycine, serine and threonine metabolism
hse00261  Monobactam biosynthesis
hse00270  Cysteine and methionine metabolism
hse00280  Valine, leucine and isoleucine degradation
hse00290  Valine, leucine and isoleucine biosynthesis
hse00300  Lysine biosynthesis
hse00310  Lysine degradation
hse00330  Arginine and proline metabolism
hse00332  Carbapenem biosynthesis
hse00340  Histidine metabolism
hse00350  Tyrosine metabolism
hse00360  Phenylalanine metabolism
hse00361  Chlorocyclohexane and chlorobenzene degradation
hse00362  Benzoate degradation
hse00364  Fluorobenzoate degradation
hse00380  Tryptophan metabolism
hse00400  Phenylalanine, tyrosine and tryptophan biosynthesis
hse00401  Novobiocin biosynthesis
hse00410  beta-Alanine metabolism
hse00430  Taurine and hypotaurine metabolism
hse00450  Selenocompound metabolism
hse00460  Cyanoamino acid metabolism
hse00470  D-Amino acid metabolism
hse00480  Glutathione metabolism
hse00500  Starch and sucrose metabolism
hse00520  Amino sugar and nucleotide sugar metabolism
hse00521  Streptomycin biosynthesis
hse00523  Polyketide sugar unit biosynthesis
hse00540  Lipopolysaccharide biosynthesis
hse00541  O-Antigen nucleotide sugar biosynthesis
hse00543  Exopolysaccharide biosynthesis
hse00550  Peptidoglycan biosynthesis
hse00552  Teichoic acid biosynthesis
hse00561  Glycerolipid metabolism
hse00562  Inositol phosphate metabolism
hse00564  Glycerophospholipid metabolism
hse00565  Ether lipid metabolism
hse00592  alpha-Linolenic acid metabolism
hse00620  Pyruvate metabolism
hse00622  Xylene degradation
hse00623  Toluene degradation
hse00625  Chloroalkane and chloroalkene degradation
hse00626  Naphthalene degradation
hse00627  Aminobenzoate degradation
hse00630  Glyoxylate and dicarboxylate metabolism
hse00633  Nitrotoluene degradation
hse00640  Propanoate metabolism
hse00643  Styrene degradation
hse00650  Butanoate metabolism
hse00660  C5-Branched dibasic acid metabolism
hse00670  One carbon pool by folate
hse00680  Methane metabolism
hse00710  Carbon fixation by Calvin cycle
hse00720  Other carbon fixation pathways
hse00730  Thiamine metabolism
hse00740  Riboflavin metabolism
hse00750  Vitamin B6 metabolism
hse00760  Nicotinate and nicotinamide metabolism
hse00770  Pantothenate and CoA biosynthesis
hse00780  Biotin metabolism
hse00785  Lipoic acid metabolism
hse00790  Folate biosynthesis
hse00791  Atrazine degradation
hse00860  Porphyrin metabolism
hse00900  Terpenoid backbone biosynthesis
hse00906  Carotenoid biosynthesis
hse00907  Pinene, camphor and geraniol degradation
hse00910  Nitrogen metabolism
hse00920  Sulfur metabolism
hse00930  Caprolactam degradation
hse00946  Degradation of flavonoids
hse00999  Biosynthesis of various plant secondary metabolites
hse01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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