KEGG   PATHWAY: iab01200
Entry
iab01200                    Pathway                                
Name
Carbon metabolism - Idiomarina abyssalis
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
iab01200  Carbon metabolism
iab01200

Module
iab_M00002  Glycolysis, core module involving three-carbon compounds [PATH:iab01200]
iab_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:iab01200]
iab_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:iab01200]
iab_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:iab01200]
iab_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:iab01200]
iab_M00012  Glyoxylate cycle [PATH:iab01200]
iab_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:iab01200]
iab_M00021  Cysteine biosynthesis, serine => cysteine [PATH:iab01200]
iab_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:iab01200]
iab_M00621  Glycine cleavage system [PATH:iab01200]
Organism
Idiomarina abyssalis [GN:iab]
KO pathway
ko01200   
LinkDB

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