KEGG   PATHWAY: idc01200
Entry
idc01200                    Pathway                                
Name
Carbon metabolism - Ideonella dechloratans
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
idc01200  Carbon metabolism
idc01200

Module
idc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:idc01200]
idc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:idc01200]
idc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:idc01200]
idc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:idc01200]
idc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:idc01200]
idc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:idc01200]
idc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:idc01200]
idc_M00012  Glyoxylate cycle [PATH:idc01200]
idc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:idc01200]
idc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:idc01200]
idc_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:idc01200]
idc_M00168  CAM (Crassulacean acid metabolism), dark [PATH:idc01200]
idc_M00169  CAM (Crassulacean acid metabolism), light [PATH:idc01200]
idc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:idc01200]
idc_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:idc01200]
idc_M00621  Glycine cleavage system [PATH:idc01200]
Organism
Ideonella dechloratans [GN:idc]
KO pathway
ko01200   
LinkDB

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