PATHWAY: idi01100 Help Entry idi01100                    Pathway                                 Name Metabolic pathways - Idiomarina sp. X4 Class BRITE hierarchy Pathway map idi01100   Metabolic pathways Module idi_M00002   Glycolysis, core module involving three-carbon compounds [PATH:idi01100] idi_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:idi01100] idi_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:idi01100] idi_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:idi01100] idi_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:idi01100] idi_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:idi01100] idi_M00012   Glyoxylate cycle [PATH:idi01100] idi_M00015   Proline biosynthesis, glutamate => proline [PATH:idi01100] idi_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:idi01100] idi_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:idi01100] idi_M00021   Cysteine biosynthesis, serine => cysteine [PATH:idi01100] idi_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:idi01100] idi_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:idi01100] idi_M00026   Histidine biosynthesis, PRPP => histidine [PATH:idi01100] idi_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:idi01100] idi_M00035   Methionine degradation [PATH:idi01100] idi_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:idi01100] idi_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:idi01100] idi_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:idi01100] idi_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:idi01100] idi_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:idi01100] idi_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:idi01100] idi_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:idi01100] idi_M00063   CMP-KDO biosynthesis [PATH:idi01100] idi_M00082   Fatty acid biosynthesis, initiation [PATH:idi01100] idi_M00083   Fatty acid biosynthesis, elongation [PATH:idi01100] idi_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:idi01100] idi_M00087   beta-Oxidation [PATH:idi01100] idi_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:idi01100] idi_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:idi01100] idi_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:idi01100] idi_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:idi01100] idi_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:idi01100] idi_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:idi01100] idi_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:idi01100] idi_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:idi01100] idi_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:idi01100] idi_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:idi01100] idi_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:idi01100] idi_M00149   Succinate dehydrogenase, prokaryotes [PATH:idi01100] idi_M00151   Cytochrome bc1 complex respiratory unit [PATH:idi01100] idi_M00155   Cytochrome c oxidase, prokaryotes [PATH:idi01100] idi_M00156   Cytochrome c oxidase, cbb3-type [PATH:idi01100] idi_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:idi01100] idi_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:idi01100] idi_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:idi01100] idi_M00555   Betaine biosynthesis, choline => betaine [PATH:idi01100] idi_M00621   Glycine cleavage system [PATH:idi01100] idi_M00844   Arginine biosynthesis, ornithine => arginine [PATH:idi01100] idi_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:idi01100] idi_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:idi01100] idi_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:idi01100] idi_M00970   Proline degradation, proline => glutamate [PATH:idi01100] Organism Idiomarina sp. X4 [GN:idi] Related pathway idi00010   Glycolysis / Gluconeogenesis idi00020   Citrate cycle (TCA cycle) idi00030   Pentose phosphate pathway idi00040   Pentose and glucuronate interconversions idi00051   Fructose and mannose metabolism idi00052   Galactose metabolism idi00053   Ascorbate and aldarate metabolism idi00061   Fatty acid biosynthesis idi00071   Fatty acid degradation idi00130   Ubiquinone and other terpenoid-quinone biosynthesis idi00190   Oxidative phosphorylation idi00220   Arginine biosynthesis idi00230   Purine metabolism idi00240   Pyrimidine metabolism idi00250   Alanine, aspartate and glutamate metabolism idi00260   Glycine, serine and threonine metabolism idi00261   Monobactam biosynthesis idi00270   Cysteine and methionine metabolism idi00280   Valine, leucine and isoleucine degradation idi00290   Valine, leucine and isoleucine biosynthesis idi00300   Lysine biosynthesis idi00310   Lysine degradation idi00330   Arginine and proline metabolism idi00332   Carbapenem biosynthesis idi00340   Histidine metabolism idi00350   Tyrosine metabolism idi00360   Phenylalanine metabolism idi00362   Benzoate degradation idi00380   Tryptophan metabolism idi00400   Phenylalanine, tyrosine and tryptophan biosynthesis idi00401   Novobiocin biosynthesis idi00410   beta-Alanine metabolism idi00430   Taurine and hypotaurine metabolism idi00450   Selenocompound metabolism idi00460   Cyanoamino acid metabolism idi00470   D-Amino acid metabolism idi00480   Glutathione metabolism idi00500   Starch and sucrose metabolism idi00520   Amino sugar and nucleotide sugar metabolism idi00521   Streptomycin biosynthesis idi00523   Polyketide sugar unit biosynthesis idi00525   Acarbose and validamycin biosynthesis idi00540   Lipopolysaccharide biosynthesis idi00541   O-Antigen nucleotide sugar biosynthesis idi00543   Exopolysaccharide biosynthesis idi00550   Peptidoglycan biosynthesis idi00552   Teichoic acid biosynthesis idi00561   Glycerolipid metabolism idi00562   Inositol phosphate metabolism idi00564   Glycerophospholipid metabolism idi00565   Ether lipid metabolism idi00592   alpha-Linolenic acid metabolism idi00620   Pyruvate metabolism idi00625   Chloroalkane and chloroalkene degradation idi00626   Naphthalene degradation idi00630   Glyoxylate and dicarboxylate metabolism idi00640   Propanoate metabolism idi00643   Styrene degradation idi00650   Butanoate metabolism idi00660   C5-Branched dibasic acid metabolism idi00670   One carbon pool by folate idi00680   Methane metabolism idi00710   Carbon fixation by Calvin cycle idi00720   Other carbon fixation pathways idi00730   Thiamine metabolism idi00740   Riboflavin metabolism idi00750   Vitamin B6 metabolism idi00760   Nicotinate and nicotinamide metabolism idi00770   Pantothenate and CoA biosynthesis idi00780   Biotin metabolism idi00785   Lipoic acid metabolism idi00790   Folate biosynthesis idi00860   Porphyrin metabolism idi00900   Terpenoid backbone biosynthesis idi00907   Pinene, camphor and geraniol degradation idi00910   Nitrogen metabolism idi00920   Sulfur metabolism idi00930   Caprolactam degradation idi00999   Biosynthesis of various plant secondary metabolites idi01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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