PATHWAY: jav01100 Help Entry jav01100                    Pathway                                 Name Metabolic pathways - Jeongeuplla avenae Class BRITE hierarchy Pathway map jav01100   Metabolic pathways Module jav_M00002   Glycolysis, core module involving three-carbon compounds [PATH:jav01100] jav_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:jav01100] jav_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:jav01100] jav_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:jav01100] jav_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:jav01100] jav_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:jav01100] jav_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:jav01100] jav_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:jav01100] jav_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:jav01100] jav_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:jav01100] jav_M00012   Glyoxylate cycle [PATH:jav01100] jav_M00015   Proline biosynthesis, glutamate => proline [PATH:jav01100] jav_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:jav01100] jav_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:jav01100] jav_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:jav01100] jav_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:jav01100] jav_M00021   Cysteine biosynthesis, serine => cysteine [PATH:jav01100] jav_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:jav01100] jav_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:jav01100] jav_M00026   Histidine biosynthesis, PRPP => histidine [PATH:jav01100] jav_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:jav01100] jav_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:jav01100] jav_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:jav01100] jav_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:jav01100] jav_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:jav01100] jav_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:jav01100] jav_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:jav01100] jav_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:jav01100] jav_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:jav01100] jav_M00082   Fatty acid biosynthesis, initiation [PATH:jav01100] jav_M00083   Fatty acid biosynthesis, elongation [PATH:jav01100] jav_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:jav01100] jav_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:jav01100] jav_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:jav01100] jav_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:jav01100] jav_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:jav01100] jav_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:jav01100] jav_M00140   C1-unit interconversion, prokaryotes [PATH:jav01100] jav_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:jav01100] jav_M00149   Succinate dehydrogenase, prokaryotes [PATH:jav01100] jav_M00151   Cytochrome bc1 complex respiratory unit [PATH:jav01100] jav_M00155   Cytochrome c oxidase, prokaryotes [PATH:jav01100] jav_M00156   Cytochrome c oxidase, cbb3-type [PATH:jav01100] jav_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:jav01100] jav_M00169   CAM (Crassulacean acid metabolism), light [PATH:jav01100] jav_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:jav01100] jav_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:jav01100] jav_M00417   Cytochrome o ubiquinol oxidase [PATH:jav01100] jav_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:jav01100] jav_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:jav01100] jav_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:jav01100] jav_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:jav01100] jav_M00555   Betaine biosynthesis, choline => betaine [PATH:jav01100] jav_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:jav01100] jav_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:jav01100] jav_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:jav01100] jav_M00793   dTDP-L-rhamnose biosynthesis [PATH:jav01100] jav_M00844   Arginine biosynthesis, ornithine => arginine [PATH:jav01100] jav_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:jav01100] jav_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:jav01100] jav_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:jav01100] jav_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:jav01100] jav_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:jav01100] jav_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:jav01100] jav_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:jav01100] jav_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:jav01100] jav_M00970   Proline degradation, proline => glutamate [PATH:jav01100] jav_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:jav01100] Organism Jeongeuplla avenae [GN:jav] Related pathway jav00010   Glycolysis / Gluconeogenesis jav00020   Citrate cycle (TCA cycle) jav00030   Pentose phosphate pathway jav00040   Pentose and glucuronate interconversions jav00051   Fructose and mannose metabolism jav00052   Galactose metabolism jav00053   Ascorbate and aldarate metabolism jav00061   Fatty acid biosynthesis jav00071   Fatty acid degradation jav00121   Secondary bile acid biosynthesis jav00130   Ubiquinone and other terpenoid-quinone biosynthesis jav00190   Oxidative phosphorylation jav00220   Arginine biosynthesis jav00230   Purine metabolism jav00240   Pyrimidine metabolism jav00250   Alanine, aspartate and glutamate metabolism jav00260   Glycine, serine and threonine metabolism jav00261   Monobactam biosynthesis jav00270   Cysteine and methionine metabolism jav00280   Valine, leucine and isoleucine degradation jav00290   Valine, leucine and isoleucine biosynthesis jav00300   Lysine biosynthesis jav00310   Lysine degradation jav00330   Arginine and proline metabolism jav00332   Carbapenem biosynthesis jav00340   Histidine metabolism jav00350   Tyrosine metabolism jav00360   Phenylalanine metabolism jav00361   Chlorocyclohexane and chlorobenzene degradation jav00362   Benzoate degradation jav00364   Fluorobenzoate degradation jav00380   Tryptophan metabolism jav00400   Phenylalanine, tyrosine and tryptophan biosynthesis jav00401   Novobiocin biosynthesis jav00410   beta-Alanine metabolism jav00430   Taurine and hypotaurine metabolism jav00440   Phosphonate and phosphinate metabolism jav00450   Selenocompound metabolism jav00460   Cyanoamino acid metabolism jav00470   D-Amino acid metabolism jav00480   Glutathione metabolism jav00500   Starch and sucrose metabolism jav00520   Amino sugar and nucleotide sugar metabolism jav00521   Streptomycin biosynthesis jav00523   Polyketide sugar unit biosynthesis jav00524   Neomycin, kanamycin and gentamicin biosynthesis jav00525   Acarbose and validamycin biosynthesis jav00540   Lipopolysaccharide biosynthesis jav00541   O-Antigen nucleotide sugar biosynthesis jav00543   Exopolysaccharide biosynthesis jav00550   Peptidoglycan biosynthesis jav00552   Teichoic acid biosynthesis jav00561   Glycerolipid metabolism jav00562   Inositol phosphate metabolism jav00564   Glycerophospholipid metabolism jav00620   Pyruvate metabolism jav00623   Toluene degradation jav00625   Chloroalkane and chloroalkene degradation jav00626   Naphthalene degradation jav00627   Aminobenzoate degradation jav00630   Glyoxylate and dicarboxylate metabolism jav00633   Nitrotoluene degradation jav00640   Propanoate metabolism jav00650   Butanoate metabolism jav00660   C5-Branched dibasic acid metabolism jav00670   One carbon pool by folate jav00680   Methane metabolism jav00710   Carbon fixation by Calvin cycle jav00720   Other carbon fixation pathways jav00730   Thiamine metabolism jav00740   Riboflavin metabolism jav00750   Vitamin B6 metabolism jav00760   Nicotinate and nicotinamide metabolism jav00770   Pantothenate and CoA biosynthesis jav00780   Biotin metabolism jav00785   Lipoic acid metabolism jav00790   Folate biosynthesis jav00860   Porphyrin metabolism jav00900   Terpenoid backbone biosynthesis jav00903   Limonene degradation jav00906   Carotenoid biosynthesis jav00907   Pinene, camphor and geraniol degradation jav00910   Nitrogen metabolism jav00920   Sulfur metabolism jav00930   Caprolactam degradation jav00946   Degradation of flavonoids jav00999   Biosynthesis of various plant secondary metabolites jav01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system