PATHWAY: jde01100 Help Entry jde01100                    Pathway                                 Name Metabolic pathways - Jonesia denitrificans Class BRITE hierarchy Pathway map jde01100   Metabolic pathways Module jde_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:jde01100] jde_M00002   Glycolysis, core module involving three-carbon compounds [PATH:jde01100] jde_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:jde01100] jde_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:jde01100] jde_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:jde01100] jde_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:jde01100] jde_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:jde01100] jde_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:jde01100] jde_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:jde01100] jde_M00015   Proline biosynthesis, glutamate => proline [PATH:jde01100] jde_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:jde01100] jde_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:jde01100] jde_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:jde01100] jde_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:jde01100] jde_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:jde01100] jde_M00021   Cysteine biosynthesis, serine => cysteine [PATH:jde01100] jde_M00026   Histidine biosynthesis, PRPP => histidine [PATH:jde01100] jde_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:jde01100] jde_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:jde01100] jde_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:jde01100] jde_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:jde01100] jde_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:jde01100] jde_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:jde01100] jde_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:jde01100] jde_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:jde01100] jde_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:jde01100] jde_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:jde01100] jde_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:jde01100] jde_M00149   Succinate dehydrogenase, prokaryotes [PATH:jde01100] jde_M00151   Cytochrome bc1 complex respiratory unit [PATH:jde01100] jde_M00155   Cytochrome c oxidase, prokaryotes [PATH:jde01100] jde_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:jde01100] jde_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:jde01100] jde_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:jde01100] jde_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:jde01100] jde_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:jde01100] jde_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:jde01100] jde_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:jde01100] jde_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:jde01100] jde_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:jde01100] jde_M00844   Arginine biosynthesis, ornithine => arginine [PATH:jde01100] jde_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:jde01100] jde_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:jde01100] jde_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:jde01100] jde_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:jde01100] jde_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:jde01100] jde_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:jde01100] jde_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:jde01100] Organism Jonesia denitrificans [GN:jde] Related pathway jde00010   Glycolysis / Gluconeogenesis jde00020   Citrate cycle (TCA cycle) jde00030   Pentose phosphate pathway jde00040   Pentose and glucuronate interconversions jde00051   Fructose and mannose metabolism jde00052   Galactose metabolism jde00053   Ascorbate and aldarate metabolism jde00061   Fatty acid biosynthesis jde00071   Fatty acid degradation jde00074   Mycolic acid biosynthesis jde00130   Ubiquinone and other terpenoid-quinone biosynthesis jde00190   Oxidative phosphorylation jde00220   Arginine biosynthesis jde00230   Purine metabolism jde00240   Pyrimidine metabolism jde00250   Alanine, aspartate and glutamate metabolism jde00260   Glycine, serine and threonine metabolism jde00261   Monobactam biosynthesis jde00270   Cysteine and methionine metabolism jde00280   Valine, leucine and isoleucine degradation jde00290   Valine, leucine and isoleucine biosynthesis jde00300   Lysine biosynthesis jde00310   Lysine degradation jde00330   Arginine and proline metabolism jde00332   Carbapenem biosynthesis jde00340   Histidine metabolism jde00350   Tyrosine metabolism jde00360   Phenylalanine metabolism jde00362   Benzoate degradation jde00380   Tryptophan metabolism jde00400   Phenylalanine, tyrosine and tryptophan biosynthesis jde00401   Novobiocin biosynthesis jde00410   beta-Alanine metabolism jde00430   Taurine and hypotaurine metabolism jde00450   Selenocompound metabolism jde00460   Cyanoamino acid metabolism jde00470   D-Amino acid metabolism jde00480   Glutathione metabolism jde00500   Starch and sucrose metabolism jde00511   Other glycan degradation jde00514   Other types of O-glycan biosynthesis jde00515   Mannose type O-glycan biosynthesis jde00520   Amino sugar and nucleotide sugar metabolism jde00521   Streptomycin biosynthesis jde00525   Acarbose and validamycin biosynthesis jde00541   O-Antigen nucleotide sugar biosynthesis jde00542   O-Antigen repeat unit biosynthesis jde00543   Exopolysaccharide biosynthesis jde00550   Peptidoglycan biosynthesis jde00552   Teichoic acid biosynthesis jde00561   Glycerolipid metabolism jde00562   Inositol phosphate metabolism jde00564   Glycerophospholipid metabolism jde00592   alpha-Linolenic acid metabolism jde00600   Sphingolipid metabolism jde00620   Pyruvate metabolism jde00622   Xylene degradation jde00625   Chloroalkane and chloroalkene degradation jde00626   Naphthalene degradation jde00630   Glyoxylate and dicarboxylate metabolism jde00640   Propanoate metabolism jde00650   Butanoate metabolism jde00660   C5-Branched dibasic acid metabolism jde00670   One carbon pool by folate jde00680   Methane metabolism jde00710   Carbon fixation by Calvin cycle jde00720   Other carbon fixation pathways jde00730   Thiamine metabolism jde00740   Riboflavin metabolism jde00750   Vitamin B6 metabolism jde00760   Nicotinate and nicotinamide metabolism jde00770   Pantothenate and CoA biosynthesis jde00780   Biotin metabolism jde00785   Lipoic acid metabolism jde00790   Folate biosynthesis jde00860   Porphyrin metabolism jde00900   Terpenoid backbone biosynthesis jde00906   Carotenoid biosynthesis jde00907   Pinene, camphor and geraniol degradation jde00910   Nitrogen metabolism jde00920   Sulfur metabolism jde00946   Degradation of flavonoids jde00998   Biosynthesis of various antibiotics jde00999   Biosynthesis of various plant secondary metabolites jde01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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