KEGG   PATHWAY: jri01100
Entry
jri01100                    Pathway                                
Name
Metabolic pathways - Janthinobacterium rivuli
Class
Pathway map
jri01100  Metabolic pathways
jri01100

Module
jri_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:jri01100]
jri_M00002  Glycolysis, core module involving three-carbon compounds [PATH:jri01100]
jri_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:jri01100]
jri_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:jri01100]
jri_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:jri01100]
jri_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:jri01100]
jri_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:jri01100]
jri_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:jri01100]
jri_M00012  Glyoxylate cycle [PATH:jri01100]
jri_M00015  Proline biosynthesis, glutamate => proline [PATH:jri01100]
jri_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:jri01100]
jri_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:jri01100]
jri_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:jri01100]
jri_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:jri01100]
jri_M00021  Cysteine biosynthesis, serine => cysteine [PATH:jri01100]
jri_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:jri01100]
jri_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:jri01100]
jri_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:jri01100]
jri_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:jri01100]
jri_M00035  Methionine degradation [PATH:jri01100]
jri_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:jri01100]
jri_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:jri01100]
jri_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:jri01100]
jri_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:jri01100]
jri_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:jri01100]
jri_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:jri01100]
jri_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:jri01100]
jri_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:jri01100]
jri_M00063  CMP-KDO biosynthesis [PATH:jri01100]
jri_M00082  Fatty acid biosynthesis, initiation [PATH:jri01100]
jri_M00083  Fatty acid biosynthesis, elongation [PATH:jri01100]
jri_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:jri01100]
jri_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:jri01100]
jri_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:jri01100]
jri_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:jri01100]
jri_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:jri01100]
jri_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:jri01100]
jri_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:jri01100]
jri_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:jri01100]
jri_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:jri01100]
jri_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:jri01100]
jri_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:jri01100]
jri_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:jri01100]
jri_M00149  Succinate dehydrogenase, prokaryotes [PATH:jri01100]
jri_M00151  Cytochrome bc1 complex respiratory unit [PATH:jri01100]
jri_M00155  Cytochrome c oxidase, prokaryotes [PATH:jri01100]
jri_M00156  Cytochrome c oxidase, cbb3-type [PATH:jri01100]
jri_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:jri01100]
jri_M00168  CAM (Crassulacean acid metabolism), dark [PATH:jri01100]
jri_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:jri01100]
jri_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:jri01100]
jri_M00417  Cytochrome o ubiquinol oxidase [PATH:jri01100]
jri_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:jri01100]
jri_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:jri01100]
jri_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:jri01100]
jri_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:jri01100]
jri_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:jri01100]
jri_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:jri01100]
jri_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:jri01100]
jri_M00621  Glycine cleavage system [PATH:jri01100]
jri_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:jri01100]
jri_M00793  dTDP-L-rhamnose biosynthesis [PATH:jri01100]
jri_M00808  Violacein biosynthesis, tryptophan => violacein [PATH:jri01100]
jri_M00844  Arginine biosynthesis, ornithine => arginine [PATH:jri01100]
jri_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:jri01100]
jri_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:jri01100]
jri_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:jri01100]
jri_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:jri01100]
jri_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:jri01100]
jri_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:jri01100]
jri_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:jri01100]
jri_M00970  Proline degradation, proline => glutamate [PATH:jri01100]
Organism
Janthinobacterium rivuli [GN:jri]
Related
pathway
jri00010  Glycolysis / Gluconeogenesis
jri00020  Citrate cycle (TCA cycle)
jri00030  Pentose phosphate pathway
jri00040  Pentose and glucuronate interconversions
jri00051  Fructose and mannose metabolism
jri00052  Galactose metabolism
jri00053  Ascorbate and aldarate metabolism
jri00061  Fatty acid biosynthesis
jri00071  Fatty acid degradation
jri00130  Ubiquinone and other terpenoid-quinone biosynthesis
jri00190  Oxidative phosphorylation
jri00220  Arginine biosynthesis
jri00230  Purine metabolism
jri00240  Pyrimidine metabolism
jri00250  Alanine, aspartate and glutamate metabolism
jri00260  Glycine, serine and threonine metabolism
jri00261  Monobactam biosynthesis
jri00270  Cysteine and methionine metabolism
jri00280  Valine, leucine and isoleucine degradation
jri00290  Valine, leucine and isoleucine biosynthesis
jri00300  Lysine biosynthesis
jri00310  Lysine degradation
jri00330  Arginine and proline metabolism
jri00332  Carbapenem biosynthesis
jri00340  Histidine metabolism
jri00350  Tyrosine metabolism
jri00360  Phenylalanine metabolism
jri00361  Chlorocyclohexane and chlorobenzene degradation
jri00362  Benzoate degradation
jri00364  Fluorobenzoate degradation
jri00380  Tryptophan metabolism
jri00400  Phenylalanine, tyrosine and tryptophan biosynthesis
jri00401  Novobiocin biosynthesis
jri00404  Staurosporine biosynthesis
jri00410  beta-Alanine metabolism
jri00430  Taurine and hypotaurine metabolism
jri00450  Selenocompound metabolism
jri00460  Cyanoamino acid metabolism
jri00470  D-Amino acid metabolism
jri00480  Glutathione metabolism
jri00500  Starch and sucrose metabolism
jri00520  Amino sugar and nucleotide sugar metabolism
jri00521  Streptomycin biosynthesis
jri00523  Polyketide sugar unit biosynthesis
jri00525  Acarbose and validamycin biosynthesis
jri00540  Lipopolysaccharide biosynthesis
jri00541  O-Antigen nucleotide sugar biosynthesis
jri00543  Exopolysaccharide biosynthesis
jri00550  Peptidoglycan biosynthesis
jri00552  Teichoic acid biosynthesis
jri00561  Glycerolipid metabolism
jri00562  Inositol phosphate metabolism
jri00564  Glycerophospholipid metabolism
jri00565  Ether lipid metabolism
jri00590  Arachidonic acid metabolism
jri00591  Linoleic acid metabolism
jri00592  alpha-Linolenic acid metabolism
jri00620  Pyruvate metabolism
jri00623  Toluene degradation
jri00625  Chloroalkane and chloroalkene degradation
jri00626  Naphthalene degradation
jri00627  Aminobenzoate degradation
jri00630  Glyoxylate and dicarboxylate metabolism
jri00633  Nitrotoluene degradation
jri00640  Propanoate metabolism
jri00643  Styrene degradation
jri00650  Butanoate metabolism
jri00660  C5-Branched dibasic acid metabolism
jri00670  One carbon pool by folate
jri00680  Methane metabolism
jri00710  Carbon fixation by Calvin cycle
jri00720  Other carbon fixation pathways
jri00730  Thiamine metabolism
jri00740  Riboflavin metabolism
jri00750  Vitamin B6 metabolism
jri00760  Nicotinate and nicotinamide metabolism
jri00770  Pantothenate and CoA biosynthesis
jri00780  Biotin metabolism
jri00785  Lipoic acid metabolism
jri00790  Folate biosynthesis
jri00860  Porphyrin metabolism
jri00900  Terpenoid backbone biosynthesis
jri00906  Carotenoid biosynthesis
jri00907  Pinene, camphor and geraniol degradation
jri00910  Nitrogen metabolism
jri00920  Sulfur metabolism
jri00946  Degradation of flavonoids
jri00999  Biosynthesis of various plant secondary metabolites
jri01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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