PATHWAY: labp01100 Help Entry labp01100                   Pathway                                 Name Metabolic pathways - Labrenzia sp. PHM005 Class BRITE hierarchy Pathway map labp01100   Metabolic pathways Module labp_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:labp01100] labp_M00002   Glycolysis, core module involving three-carbon compounds [PATH:labp01100] labp_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:labp01100] labp_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:labp01100] labp_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:labp01100] labp_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:labp01100] labp_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:labp01100] labp_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:labp01100] labp_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:labp01100] labp_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:labp01100] labp_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:labp01100] labp_M00015   Proline biosynthesis, glutamate => proline [PATH:labp01100] labp_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:labp01100] labp_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:labp01100] labp_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:labp01100] labp_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:labp01100] labp_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:labp01100] labp_M00021   Cysteine biosynthesis, serine => cysteine [PATH:labp01100] labp_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:labp01100] labp_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:labp01100] labp_M00026   Histidine biosynthesis, PRPP => histidine [PATH:labp01100] labp_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:labp01100] labp_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:labp01100] labp_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:labp01100] labp_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:labp01100] labp_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:labp01100] labp_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:labp01100] labp_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:labp01100] labp_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:labp01100] labp_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:labp01100] labp_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:labp01100] labp_M00082   Fatty acid biosynthesis, initiation [PATH:labp01100] labp_M00083   Fatty acid biosynthesis, elongation [PATH:labp01100] labp_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:labp01100] labp_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:labp01100] labp_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:labp01100] labp_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:labp01100] labp_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:labp01100] labp_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:labp01100] labp_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:labp01100] labp_M00140   C1-unit interconversion, prokaryotes [PATH:labp01100] labp_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:labp01100] labp_M00149   Succinate dehydrogenase, prokaryotes [PATH:labp01100] labp_M00151   Cytochrome bc1 complex respiratory unit [PATH:labp01100] labp_M00155   Cytochrome c oxidase, prokaryotes [PATH:labp01100] labp_M00156   Cytochrome c oxidase, cbb3-type [PATH:labp01100] labp_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:labp01100] labp_M00169   CAM (Crassulacean acid metabolism), light [PATH:labp01100] labp_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:labp01100] labp_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:labp01100] labp_M00529   Denitrification, nitrate => nitrogen [PATH:labp01100] labp_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:labp01100] labp_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:labp01100] labp_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:labp01100] labp_M00555   Betaine biosynthesis, choline => betaine [PATH:labp01100] labp_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:labp01100] labp_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:labp01100] labp_M00621   Glycine cleavage system [PATH:labp01100] labp_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:labp01100] labp_M00793   dTDP-L-rhamnose biosynthesis [PATH:labp01100] labp_M00844   Arginine biosynthesis, ornithine => arginine [PATH:labp01100] labp_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:labp01100] labp_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:labp01100] labp_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:labp01100] labp_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:labp01100] labp_M00919   Ectoine degradation, ectoine => aspartate [PATH:labp01100] labp_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:labp01100] labp_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:labp01100] labp_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:labp01100] labp_M00970   Proline degradation, proline => glutamate [PATH:labp01100] Organism Labrenzia sp. PHM005 [GN:labp] Related pathway labp00010   Glycolysis / Gluconeogenesis labp00020   Citrate cycle (TCA cycle) labp00030   Pentose phosphate pathway labp00040   Pentose and glucuronate interconversions labp00051   Fructose and mannose metabolism labp00052   Galactose metabolism labp00053   Ascorbate and aldarate metabolism labp00061   Fatty acid biosynthesis labp00071   Fatty acid degradation labp00130   Ubiquinone and other terpenoid-quinone biosynthesis labp00190   Oxidative phosphorylation labp00220   Arginine biosynthesis labp00230   Purine metabolism labp00240   Pyrimidine metabolism labp00250   Alanine, aspartate and glutamate metabolism labp00260   Glycine, serine and threonine metabolism labp00261   Monobactam biosynthesis labp00270   Cysteine and methionine metabolism labp00280   Valine, leucine and isoleucine degradation labp00290   Valine, leucine and isoleucine biosynthesis labp00300   Lysine biosynthesis labp00310   Lysine degradation labp00330   Arginine and proline metabolism labp00332   Carbapenem biosynthesis labp00340   Histidine metabolism labp00350   Tyrosine metabolism labp00360   Phenylalanine metabolism labp00361   Chlorocyclohexane and chlorobenzene degradation labp00362   Benzoate degradation labp00364   Fluorobenzoate degradation labp00380   Tryptophan metabolism labp00400   Phenylalanine, tyrosine and tryptophan biosynthesis labp00401   Novobiocin biosynthesis labp00410   beta-Alanine metabolism labp00430   Taurine and hypotaurine metabolism labp00440   Phosphonate and phosphinate metabolism labp00450   Selenocompound metabolism labp00460   Cyanoamino acid metabolism labp00470   D-Amino acid metabolism labp00480   Glutathione metabolism labp00500   Starch and sucrose metabolism labp00520   Amino sugar and nucleotide sugar metabolism labp00521   Streptomycin biosynthesis labp00523   Polyketide sugar unit biosynthesis labp00525   Acarbose and validamycin biosynthesis labp00540   Lipopolysaccharide biosynthesis labp00541   O-Antigen nucleotide sugar biosynthesis labp00543   Exopolysaccharide biosynthesis labp00550   Peptidoglycan biosynthesis labp00552   Teichoic acid biosynthesis labp00561   Glycerolipid metabolism labp00562   Inositol phosphate metabolism labp00564   Glycerophospholipid metabolism labp00600   Sphingolipid metabolism labp00620   Pyruvate metabolism labp00623   Toluene degradation labp00625   Chloroalkane and chloroalkene degradation labp00626   Naphthalene degradation labp00627   Aminobenzoate degradation labp00630   Glyoxylate and dicarboxylate metabolism labp00633   Nitrotoluene degradation labp00640   Propanoate metabolism labp00643   Styrene degradation labp00650   Butanoate metabolism labp00660   C5-Branched dibasic acid metabolism labp00670   One carbon pool by folate labp00680   Methane metabolism labp00710   Carbon fixation by Calvin cycle labp00720   Other carbon fixation pathways labp00730   Thiamine metabolism labp00740   Riboflavin metabolism labp00750   Vitamin B6 metabolism labp00760   Nicotinate and nicotinamide metabolism labp00770   Pantothenate and CoA biosynthesis labp00780   Biotin metabolism labp00785   Lipoic acid metabolism labp00790   Folate biosynthesis labp00860   Porphyrin metabolism labp00900   Terpenoid backbone biosynthesis labp00906   Carotenoid biosynthesis labp00907   Pinene, camphor and geraniol degradation labp00910   Nitrogen metabolism labp00920   Sulfur metabolism labp00930   Caprolactam degradation labp00946   Degradation of flavonoids labp00999   Biosynthesis of various plant secondary metabolites labp01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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