PATHWAY: labr01100 Help Entry labr01100                   Pathway                                 Name Metabolic pathways - Labrenzia sp. VG12 Class BRITE hierarchy Pathway map labr01100   Metabolic pathways Module labr_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:labr01100] labr_M00002   Glycolysis, core module involving three-carbon compounds [PATH:labr01100] labr_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:labr01100] labr_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:labr01100] labr_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:labr01100] labr_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:labr01100] labr_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:labr01100] labr_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:labr01100] labr_M00015   Proline biosynthesis, glutamate => proline [PATH:labr01100] labr_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:labr01100] labr_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:labr01100] labr_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:labr01100] labr_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:labr01100] labr_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:labr01100] labr_M00021   Cysteine biosynthesis, serine => cysteine [PATH:labr01100] labr_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:labr01100] labr_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:labr01100] labr_M00026   Histidine biosynthesis, PRPP => histidine [PATH:labr01100] labr_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:labr01100] labr_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:labr01100] labr_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:labr01100] labr_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:labr01100] labr_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:labr01100] labr_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:labr01100] labr_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:labr01100] labr_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:labr01100] labr_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:labr01100] labr_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:labr01100] labr_M00082   Fatty acid biosynthesis, initiation [PATH:labr01100] labr_M00083   Fatty acid biosynthesis, elongation [PATH:labr01100] labr_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:labr01100] labr_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:labr01100] labr_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:labr01100] labr_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:labr01100] labr_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:labr01100] labr_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:labr01100] labr_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:labr01100] labr_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:labr01100] labr_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:labr01100] labr_M00140   C1-unit interconversion, prokaryotes [PATH:labr01100] labr_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:labr01100] labr_M00149   Succinate dehydrogenase, prokaryotes [PATH:labr01100] labr_M00151   Cytochrome bc1 complex respiratory unit [PATH:labr01100] labr_M00155   Cytochrome c oxidase, prokaryotes [PATH:labr01100] labr_M00156   Cytochrome c oxidase, cbb3-type [PATH:labr01100] labr_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:labr01100] labr_M00169   CAM (Crassulacean acid metabolism), light [PATH:labr01100] labr_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:labr01100] labr_M00417   Cytochrome o ubiquinol oxidase [PATH:labr01100] labr_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:labr01100] labr_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:labr01100] labr_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:labr01100] labr_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:labr01100] labr_M00555   Betaine biosynthesis, choline => betaine [PATH:labr01100] labr_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:labr01100] labr_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:labr01100] labr_M00621   Glycine cleavage system [PATH:labr01100] labr_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:labr01100] labr_M00844   Arginine biosynthesis, ornithine => arginine [PATH:labr01100] labr_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:labr01100] labr_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:labr01100] labr_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:labr01100] labr_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:labr01100] labr_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:labr01100] labr_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:labr01100] labr_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:labr01100] labr_M00970   Proline degradation, proline => glutamate [PATH:labr01100] Organism Labrenzia sp. VG12 [GN:labr] Related pathway labr00010   Glycolysis / Gluconeogenesis labr00020   Citrate cycle (TCA cycle) labr00030   Pentose phosphate pathway labr00040   Pentose and glucuronate interconversions labr00051   Fructose and mannose metabolism labr00052   Galactose metabolism labr00053   Ascorbate and aldarate metabolism labr00061   Fatty acid biosynthesis labr00071   Fatty acid degradation labr00100   Steroid biosynthesis labr00130   Ubiquinone and other terpenoid-quinone biosynthesis labr00190   Oxidative phosphorylation labr00220   Arginine biosynthesis labr00230   Purine metabolism labr00240   Pyrimidine metabolism labr00250   Alanine, aspartate and glutamate metabolism labr00260   Glycine, serine and threonine metabolism labr00261   Monobactam biosynthesis labr00270   Cysteine and methionine metabolism labr00280   Valine, leucine and isoleucine degradation labr00290   Valine, leucine and isoleucine biosynthesis labr00300   Lysine biosynthesis labr00310   Lysine degradation labr00330   Arginine and proline metabolism labr00332   Carbapenem biosynthesis labr00340   Histidine metabolism labr00350   Tyrosine metabolism labr00360   Phenylalanine metabolism labr00361   Chlorocyclohexane and chlorobenzene degradation labr00362   Benzoate degradation labr00364   Fluorobenzoate degradation labr00380   Tryptophan metabolism labr00400   Phenylalanine, tyrosine and tryptophan biosynthesis labr00401   Novobiocin biosynthesis labr00410   beta-Alanine metabolism labr00430   Taurine and hypotaurine metabolism labr00440   Phosphonate and phosphinate metabolism labr00450   Selenocompound metabolism labr00460   Cyanoamino acid metabolism labr00470   D-Amino acid metabolism labr00480   Glutathione metabolism labr00500   Starch and sucrose metabolism labr00511   Other glycan degradation labr00520   Amino sugar and nucleotide sugar metabolism labr00521   Streptomycin biosynthesis labr00523   Polyketide sugar unit biosynthesis labr00525   Acarbose and validamycin biosynthesis labr00540   Lipopolysaccharide biosynthesis labr00541   O-Antigen nucleotide sugar biosynthesis labr00543   Exopolysaccharide biosynthesis labr00550   Peptidoglycan biosynthesis labr00552   Teichoic acid biosynthesis labr00561   Glycerolipid metabolism labr00562   Inositol phosphate metabolism labr00564   Glycerophospholipid metabolism labr00600   Sphingolipid metabolism labr00620   Pyruvate metabolism labr00621   Dioxin degradation labr00622   Xylene degradation labr00623   Toluene degradation labr00624   Polycyclic aromatic hydrocarbon degradation labr00625   Chloroalkane and chloroalkene degradation labr00626   Naphthalene degradation labr00627   Aminobenzoate degradation labr00630   Glyoxylate and dicarboxylate metabolism labr00633   Nitrotoluene degradation labr00640   Propanoate metabolism labr00642   Ethylbenzene degradation labr00643   Styrene degradation labr00650   Butanoate metabolism labr00660   C5-Branched dibasic acid metabolism labr00670   One carbon pool by folate labr00680   Methane metabolism labr00710   Carbon fixation by Calvin cycle labr00720   Other carbon fixation pathways labr00730   Thiamine metabolism labr00740   Riboflavin metabolism labr00750   Vitamin B6 metabolism labr00760   Nicotinate and nicotinamide metabolism labr00770   Pantothenate and CoA biosynthesis labr00780   Biotin metabolism labr00785   Lipoic acid metabolism labr00790   Folate biosynthesis labr00791   Atrazine degradation labr00860   Porphyrin metabolism labr00900   Terpenoid backbone biosynthesis labr00903   Limonene degradation labr00906   Carotenoid biosynthesis labr00907   Pinene, camphor and geraniol degradation labr00910   Nitrogen metabolism labr00920   Sulfur metabolism labr00930   Caprolactam degradation labr00946   Degradation of flavonoids labr00999   Biosynthesis of various plant secondary metabolites labr01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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