PATHWAY: labt01100 Help Entry labt01100                   Pathway                                 Name Metabolic pathways - Labrenzia sp. THAF35 Class BRITE hierarchy Pathway map labt01100   Metabolic pathways Module labt_M00002   Glycolysis, core module involving three-carbon compounds [PATH:labt01100] labt_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:labt01100] labt_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:labt01100] labt_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:labt01100] labt_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:labt01100] labt_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:labt01100] labt_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:labt01100] labt_M00015   Proline biosynthesis, glutamate => proline [PATH:labt01100] labt_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:labt01100] labt_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:labt01100] labt_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:labt01100] labt_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:labt01100] labt_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:labt01100] labt_M00021   Cysteine biosynthesis, serine => cysteine [PATH:labt01100] labt_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:labt01100] labt_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:labt01100] labt_M00026   Histidine biosynthesis, PRPP => histidine [PATH:labt01100] labt_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:labt01100] labt_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:labt01100] labt_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:labt01100] labt_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:labt01100] labt_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:labt01100] labt_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:labt01100] labt_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:labt01100] labt_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:labt01100] labt_M00082   Fatty acid biosynthesis, initiation [PATH:labt01100] labt_M00083   Fatty acid biosynthesis, elongation [PATH:labt01100] labt_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:labt01100] labt_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:labt01100] labt_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:labt01100] labt_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:labt01100] labt_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:labt01100] labt_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:labt01100] labt_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:labt01100] labt_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:labt01100] labt_M00140   C1-unit interconversion, prokaryotes [PATH:labt01100] labt_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:labt01100] labt_M00149   Succinate dehydrogenase, prokaryotes [PATH:labt01100] labt_M00151   Cytochrome bc1 complex respiratory unit [PATH:labt01100] labt_M00155   Cytochrome c oxidase, prokaryotes [PATH:labt01100] labt_M00156   Cytochrome c oxidase, cbb3-type [PATH:labt01100] labt_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:labt01100] labt_M00169   CAM (Crassulacean acid metabolism), light [PATH:labt01100] labt_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:labt01100] labt_M00417   Cytochrome o ubiquinol oxidase [PATH:labt01100] labt_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:labt01100] labt_M00529   Denitrification, nitrate => nitrogen [PATH:labt01100] labt_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:labt01100] labt_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:labt01100] labt_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:labt01100] labt_M00555   Betaine biosynthesis, choline => betaine [PATH:labt01100] labt_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:labt01100] labt_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:labt01100] labt_M00621   Glycine cleavage system [PATH:labt01100] labt_M00623   Phthalate degradation, phthalate => protocatechuate [PATH:labt01100] labt_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:labt01100] labt_M00793   dTDP-L-rhamnose biosynthesis [PATH:labt01100] labt_M00844   Arginine biosynthesis, ornithine => arginine [PATH:labt01100] labt_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:labt01100] labt_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:labt01100] labt_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:labt01100] labt_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:labt01100] labt_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:labt01100] labt_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:labt01100] labt_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:labt01100] labt_M00970   Proline degradation, proline => glutamate [PATH:labt01100] Organism Labrenzia sp. THAF35 [GN:labt] Related pathway labt00010   Glycolysis / Gluconeogenesis labt00020   Citrate cycle (TCA cycle) labt00030   Pentose phosphate pathway labt00040   Pentose and glucuronate interconversions labt00051   Fructose and mannose metabolism labt00052   Galactose metabolism labt00053   Ascorbate and aldarate metabolism labt00061   Fatty acid biosynthesis labt00071   Fatty acid degradation labt00074   Mycolic acid biosynthesis labt00100   Steroid biosynthesis labt00130   Ubiquinone and other terpenoid-quinone biosynthesis labt00190   Oxidative phosphorylation labt00220   Arginine biosynthesis labt00230   Purine metabolism labt00240   Pyrimidine metabolism labt00250   Alanine, aspartate and glutamate metabolism labt00260   Glycine, serine and threonine metabolism labt00261   Monobactam biosynthesis labt00270   Cysteine and methionine metabolism labt00280   Valine, leucine and isoleucine degradation labt00290   Valine, leucine and isoleucine biosynthesis labt00300   Lysine biosynthesis labt00310   Lysine degradation labt00330   Arginine and proline metabolism labt00332   Carbapenem biosynthesis labt00340   Histidine metabolism labt00350   Tyrosine metabolism labt00360   Phenylalanine metabolism labt00361   Chlorocyclohexane and chlorobenzene degradation labt00362   Benzoate degradation labt00364   Fluorobenzoate degradation labt00380   Tryptophan metabolism labt00400   Phenylalanine, tyrosine and tryptophan biosynthesis labt00401   Novobiocin biosynthesis labt00410   beta-Alanine metabolism labt00430   Taurine and hypotaurine metabolism labt00440   Phosphonate and phosphinate metabolism labt00450   Selenocompound metabolism labt00460   Cyanoamino acid metabolism labt00470   D-Amino acid metabolism labt00480   Glutathione metabolism labt00500   Starch and sucrose metabolism labt00511   Other glycan degradation labt00520   Amino sugar and nucleotide sugar metabolism labt00521   Streptomycin biosynthesis labt00523   Polyketide sugar unit biosynthesis labt00525   Acarbose and validamycin biosynthesis labt00540   Lipopolysaccharide biosynthesis labt00541   O-Antigen nucleotide sugar biosynthesis labt00543   Exopolysaccharide biosynthesis labt00550   Peptidoglycan biosynthesis labt00552   Teichoic acid biosynthesis labt00561   Glycerolipid metabolism labt00562   Inositol phosphate metabolism labt00564   Glycerophospholipid metabolism labt00572   Arabinogalactan biosynthesis - Mycobacterium labt00600   Sphingolipid metabolism labt00620   Pyruvate metabolism labt00623   Toluene degradation labt00624   Polycyclic aromatic hydrocarbon degradation labt00625   Chloroalkane and chloroalkene degradation labt00626   Naphthalene degradation labt00627   Aminobenzoate degradation labt00630   Glyoxylate and dicarboxylate metabolism labt00633   Nitrotoluene degradation labt00640   Propanoate metabolism labt00642   Ethylbenzene degradation labt00643   Styrene degradation labt00650   Butanoate metabolism labt00660   C5-Branched dibasic acid metabolism labt00670   One carbon pool by folate labt00680   Methane metabolism labt00710   Carbon fixation by Calvin cycle labt00720   Other carbon fixation pathways labt00730   Thiamine metabolism labt00740   Riboflavin metabolism labt00750   Vitamin B6 metabolism labt00760   Nicotinate and nicotinamide metabolism labt00770   Pantothenate and CoA biosynthesis labt00780   Biotin metabolism labt00785   Lipoic acid metabolism labt00790   Folate biosynthesis labt00791   Atrazine degradation labt00860   Porphyrin metabolism labt00900   Terpenoid backbone biosynthesis labt00903   Limonene degradation labt00906   Carotenoid biosynthesis labt00907   Pinene, camphor and geraniol degradation labt00910   Nitrogen metabolism labt00920   Sulfur metabolism labt00930   Caprolactam degradation labt00946   Degradation of flavonoids labt00999   Biosynthesis of various plant secondary metabolites labt01040   Biosynthesis of unsaturated fatty acids labt01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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