PATHWAY: lap01100 Help Entry lap01100                    Pathway                                 Name Metabolic pathways - Labrenzia sp. CP4 Class BRITE hierarchy Pathway map lap01100   Metabolic pathways Module lap_M00002   Glycolysis, core module involving three-carbon compounds [PATH:lap01100] lap_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lap01100] lap_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:lap01100] lap_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lap01100] lap_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:lap01100] lap_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lap01100] lap_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lap01100] lap_M00015   Proline biosynthesis, glutamate => proline [PATH:lap01100] lap_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:lap01100] lap_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:lap01100] lap_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lap01100] lap_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lap01100] lap_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:lap01100] lap_M00021   Cysteine biosynthesis, serine => cysteine [PATH:lap01100] lap_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lap01100] lap_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:lap01100] lap_M00026   Histidine biosynthesis, PRPP => histidine [PATH:lap01100] lap_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:lap01100] lap_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lap01100] lap_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lap01100] lap_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lap01100] lap_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lap01100] lap_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lap01100] lap_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lap01100] lap_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:lap01100] lap_M00082   Fatty acid biosynthesis, initiation [PATH:lap01100] lap_M00083   Fatty acid biosynthesis, elongation [PATH:lap01100] lap_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:lap01100] lap_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:lap01100] lap_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lap01100] lap_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lap01100] lap_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:lap01100] lap_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:lap01100] lap_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:lap01100] lap_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:lap01100] lap_M00140   C1-unit interconversion, prokaryotes [PATH:lap01100] lap_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:lap01100] lap_M00149   Succinate dehydrogenase, prokaryotes [PATH:lap01100] lap_M00151   Cytochrome bc1 complex respiratory unit [PATH:lap01100] lap_M00155   Cytochrome c oxidase, prokaryotes [PATH:lap01100] lap_M00156   Cytochrome c oxidase, cbb3-type [PATH:lap01100] lap_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:lap01100] lap_M00169   CAM (Crassulacean acid metabolism), light [PATH:lap01100] lap_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lap01100] lap_M00417   Cytochrome o ubiquinol oxidase [PATH:lap01100] lap_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lap01100] lap_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:lap01100] lap_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lap01100] lap_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:lap01100] lap_M00555   Betaine biosynthesis, choline => betaine [PATH:lap01100] lap_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lap01100] lap_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:lap01100] lap_M00621   Glycine cleavage system [PATH:lap01100] lap_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:lap01100] lap_M00793   dTDP-L-rhamnose biosynthesis [PATH:lap01100] lap_M00844   Arginine biosynthesis, ornithine => arginine [PATH:lap01100] lap_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lap01100] lap_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lap01100] lap_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:lap01100] lap_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lap01100] lap_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:lap01100] lap_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:lap01100] lap_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:lap01100] lap_M00970   Proline degradation, proline => glutamate [PATH:lap01100] Organism Labrenzia sp. CP4 [GN:lap] Related pathway lap00010   Glycolysis / Gluconeogenesis lap00020   Citrate cycle (TCA cycle) lap00030   Pentose phosphate pathway lap00040   Pentose and glucuronate interconversions lap00051   Fructose and mannose metabolism lap00052   Galactose metabolism lap00053   Ascorbate and aldarate metabolism lap00061   Fatty acid biosynthesis lap00071   Fatty acid degradation lap00100   Steroid biosynthesis lap00130   Ubiquinone and other terpenoid-quinone biosynthesis lap00190   Oxidative phosphorylation lap00220   Arginine biosynthesis lap00230   Purine metabolism lap00240   Pyrimidine metabolism lap00250   Alanine, aspartate and glutamate metabolism lap00260   Glycine, serine and threonine metabolism lap00261   Monobactam biosynthesis lap00270   Cysteine and methionine metabolism lap00280   Valine, leucine and isoleucine degradation lap00290   Valine, leucine and isoleucine biosynthesis lap00300   Lysine biosynthesis lap00310   Lysine degradation lap00330   Arginine and proline metabolism lap00332   Carbapenem biosynthesis lap00340   Histidine metabolism lap00350   Tyrosine metabolism lap00360   Phenylalanine metabolism lap00361   Chlorocyclohexane and chlorobenzene degradation lap00362   Benzoate degradation lap00364   Fluorobenzoate degradation lap00380   Tryptophan metabolism lap00400   Phenylalanine, tyrosine and tryptophan biosynthesis lap00401   Novobiocin biosynthesis lap00410   beta-Alanine metabolism lap00430   Taurine and hypotaurine metabolism lap00440   Phosphonate and phosphinate metabolism lap00450   Selenocompound metabolism lap00460   Cyanoamino acid metabolism lap00470   D-Amino acid metabolism lap00480   Glutathione metabolism lap00500   Starch and sucrose metabolism lap00511   Other glycan degradation lap00520   Amino sugar and nucleotide sugar metabolism lap00521   Streptomycin biosynthesis lap00523   Polyketide sugar unit biosynthesis lap00525   Acarbose and validamycin biosynthesis lap00540   Lipopolysaccharide biosynthesis lap00541   O-Antigen nucleotide sugar biosynthesis lap00543   Exopolysaccharide biosynthesis lap00550   Peptidoglycan biosynthesis lap00552   Teichoic acid biosynthesis lap00561   Glycerolipid metabolism lap00562   Inositol phosphate metabolism lap00564   Glycerophospholipid metabolism lap00600   Sphingolipid metabolism lap00620   Pyruvate metabolism lap00623   Toluene degradation lap00624   Polycyclic aromatic hydrocarbon degradation lap00625   Chloroalkane and chloroalkene degradation lap00626   Naphthalene degradation lap00627   Aminobenzoate degradation lap00630   Glyoxylate and dicarboxylate metabolism lap00633   Nitrotoluene degradation lap00640   Propanoate metabolism lap00642   Ethylbenzene degradation lap00643   Styrene degradation lap00650   Butanoate metabolism lap00660   C5-Branched dibasic acid metabolism lap00670   One carbon pool by folate lap00680   Methane metabolism lap00710   Carbon fixation by Calvin cycle lap00720   Other carbon fixation pathways lap00730   Thiamine metabolism lap00740   Riboflavin metabolism lap00750   Vitamin B6 metabolism lap00760   Nicotinate and nicotinamide metabolism lap00770   Pantothenate and CoA biosynthesis lap00780   Biotin metabolism lap00785   Lipoic acid metabolism lap00790   Folate biosynthesis lap00791   Atrazine degradation lap00860   Porphyrin metabolism lap00900   Terpenoid backbone biosynthesis lap00906   Carotenoid biosynthesis lap00907   Pinene, camphor and geraniol degradation lap00910   Nitrogen metabolism lap00920   Sulfur metabolism lap00930   Caprolactam degradation lap00946   Degradation of flavonoids lap00999   Biosynthesis of various plant secondary metabolites lap01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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