KEGG   PATHWAY: lcf01100
Entry
lcf01100                    Pathway                                
Name
Metabolic pathways - Lates calcarifer (barramundi perch)
Class
Pathway map
lcf01100  Metabolic pathways
lcf01100

Module
lcf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lcf01100]
lcf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lcf01100]
lcf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lcf01100]
lcf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lcf01100]
lcf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lcf01100]
lcf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lcf01100]
lcf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lcf01100]
lcf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lcf01100]
lcf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lcf01100]
lcf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lcf01100]
lcf_M00014  Glucuronate pathway (uronate pathway) [PATH:lcf01100]
lcf_M00015  Proline biosynthesis, glutamate => proline [PATH:lcf01100]
lcf_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lcf01100]
lcf_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:lcf01100]
lcf_M00029  Urea cycle [PATH:lcf01100]
lcf_M00032  Lysine degradation, lysine => saccharopine => acetoacetyl-CoA [PATH:lcf01100]
lcf_M00034  Methionine salvage pathway [PATH:lcf01100]
lcf_M00035  Methionine degradation [PATH:lcf01100]
lcf_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:lcf01100]
lcf_M00037  Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH:lcf01100]
lcf_M00038  Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH:lcf01100]
lcf_M00042  Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH:lcf01100]
lcf_M00043  Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH:lcf01100]
lcf_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:lcf01100]
lcf_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lcf01100]
lcf_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lcf01100]
lcf_M00047  Creatine pathway [PATH:lcf01100]
lcf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lcf01100]
lcf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lcf01100]
lcf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lcf01100]
lcf_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:lcf01100]
lcf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lcf01100]
lcf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lcf01100]
lcf_M00055  N-glycan precursor biosynthesis [PATH:lcf01100]
lcf_M00057  Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH:lcf01100]
lcf_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone [PATH:lcf01100]
lcf_M00059  Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH:lcf01100]
lcf_M00065  GPI-anchor biosynthesis, core oligosaccharide [PATH:lcf01100]
lcf_M00066  Lactosylceramide biosynthesis [PATH:lcf01100]
lcf_M00067  Sulfoglycolipids biosynthesis, ceramide/1-alkyl-2-acylglycerol => sulfatide/seminolipid [PATH:lcf01100]
lcf_M00069  Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH:lcf01100]
lcf_M00070  Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH:lcf01100]
lcf_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH:lcf01100]
lcf_M00073  N-glycan precursor trimming [PATH:lcf01100]
lcf_M00075  N-glycan biosynthesis, complex type [PATH:lcf01100]
lcf_M00076  Dermatan sulfate degradation [PATH:lcf01100]
lcf_M00077  Chondroitin sulfate degradation [PATH:lcf01100]
lcf_M00078  Heparan sulfate degradation [PATH:lcf01100]
lcf_M00079  Keratan sulfate degradation [PATH:lcf01100]
lcf_M00082  Fatty acid biosynthesis, initiation [PATH:lcf01100]
lcf_M00083  Fatty acid biosynthesis, elongation [PATH:lcf01100]
lcf_M00085  Fatty acid elongation in mitochondria [PATH:lcf01100]
lcf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lcf01100]
lcf_M00087  beta-Oxidation [PATH:lcf01100]
lcf_M00089  Triacylglycerol biosynthesis [PATH:lcf01100]
lcf_M00090  Phosphatidylcholine (PC) biosynthesis, choline => PC [PATH:lcf01100]
lcf_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:lcf01100]
lcf_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:lcf01100]
lcf_M00094  Ceramide biosynthesis [PATH:lcf01100]
lcf_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:lcf01100]
lcf_M00098  Acylglycerol degradation [PATH:lcf01100]
lcf_M00099  Sphingosine biosynthesis [PATH:lcf01100]
lcf_M00100  Sphingosine degradation [PATH:lcf01100]
lcf_M00101  Cholesterol biosynthesis, FPP => cholesterol [PATH:lcf01100]
lcf_M00103  Cholecalciferol biosynthesis [PATH:lcf01100]
lcf_M00107  Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH:lcf01100]
lcf_M00109  C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH:lcf01100]
lcf_M00110  C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH:lcf01100]
lcf_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:lcf01100]
lcf_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lcf01100]
lcf_M00128  Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:lcf01100]
lcf_M00130  Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH:lcf01100]
lcf_M00131  Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH:lcf01100]
lcf_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:lcf01100]
lcf_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:lcf01100]
lcf_M00135  GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:lcf01100]
lcf_M00141  C1-unit interconversion, eukaryotes [PATH:lcf01100]
lcf_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:lcf01100]
lcf_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:lcf01100]
lcf_M00146  NADH dehydrogenase (ubiquinone) 1 alpha subcomplex [PATH:lcf01100]
lcf_M00147  NADH dehydrogenase (ubiquinone) 1 beta subcomplex [PATH:lcf01100]
lcf_M00148  Succinate dehydrogenase (ubiquinone) [PATH:lcf01100]
lcf_M00151  Cytochrome bc1 complex respiratory unit [PATH:lcf01100]
lcf_M00152  Cytochrome bc1 complex [PATH:lcf01100]
lcf_M00154  Cytochrome c oxidase [PATH:lcf01100]
lcf_M00160  V-type ATPase, eukaryotes [PATH:lcf01100]
lcf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lcf01100]
lcf_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:lcf01100]
lcf_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes [PATH:lcf01100]
lcf_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:lcf01100]
lcf_M00546  Purine degradation, xanthine => urea [PATH:lcf01100]
lcf_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lcf01100]
lcf_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:lcf01100]
lcf_M00555  Betaine biosynthesis, choline => betaine [PATH:lcf01100]
lcf_M00621  Glycine cleavage system [PATH:lcf01100]
lcf_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:lcf01100]
lcf_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:lcf01100]
lcf_M00842  Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:lcf01100]
lcf_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lcf01100]
lcf_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:lcf01100]
lcf_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:lcf01100]
lcf_M00861  beta-Oxidation, peroxisome, VLCFA [PATH:lcf01100]
lcf_M00868  Heme biosynthesis, animals and fungi, glycine => heme [PATH:lcf01100]
lcf_M00872  O-glycan biosynthesis, mannose type (core M3) [PATH:lcf01100]
lcf_M00873  Fatty acid biosynthesis in mitochondria, animals [PATH:lcf01100]
lcf_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lcf01100]
lcf_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:lcf01100]
lcf_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:lcf01100]
lcf_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:lcf01100]
lcf_M00912  NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:lcf01100]
lcf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lcf01100]
lcf_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:lcf01100]
lcf_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:lcf01100]
lcf_M00970  Proline degradation, proline => glutamate [PATH:lcf01100]
lcf_M00972  Proline metabolism [PATH:lcf01100]
lcf_M00974  Betaine metabolism, animals, betaine => glycine [PATH:lcf01100]
lcf_M00976  C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH:lcf01100]
Organism
Lates calcarifer (barramundi perch) [GN:lcf]
Related
pathway
lcf00010  Glycolysis / Gluconeogenesis
lcf00020  Citrate cycle (TCA cycle)
lcf00030  Pentose phosphate pathway
lcf00040  Pentose and glucuronate interconversions
lcf00051  Fructose and mannose metabolism
lcf00052  Galactose metabolism
lcf00053  Ascorbate and aldarate metabolism
lcf00061  Fatty acid biosynthesis
lcf00062  Fatty acid elongation
lcf00071  Fatty acid degradation
lcf00100  Steroid biosynthesis
lcf00120  Primary bile acid biosynthesis
lcf00130  Ubiquinone and other terpenoid-quinone biosynthesis
lcf00140  Steroid hormone biosynthesis
lcf00190  Oxidative phosphorylation
lcf00220  Arginine biosynthesis
lcf00230  Purine metabolism
lcf00232  Caffeine metabolism
lcf00240  Pyrimidine metabolism
lcf00250  Alanine, aspartate and glutamate metabolism
lcf00260  Glycine, serine and threonine metabolism
lcf00270  Cysteine and methionine metabolism
lcf00280  Valine, leucine and isoleucine degradation
lcf00290  Valine, leucine and isoleucine biosynthesis
lcf00310  Lysine degradation
lcf00330  Arginine and proline metabolism
lcf00340  Histidine metabolism
lcf00350  Tyrosine metabolism
lcf00360  Phenylalanine metabolism
lcf00380  Tryptophan metabolism
lcf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lcf00410  beta-Alanine metabolism
lcf00430  Taurine and hypotaurine metabolism
lcf00440  Phosphonate and phosphinate metabolism
lcf00450  Selenocompound metabolism
lcf00470  D-Amino acid metabolism
lcf00480  Glutathione metabolism
lcf00500  Starch and sucrose metabolism
lcf00510  N-Glycan biosynthesis
lcf00511  Other glycan degradation
lcf00512  Mucin type O-glycan biosynthesis
lcf00513  Various types of N-glycan biosynthesis
lcf00514  Other types of O-glycan biosynthesis
lcf00515  Mannose type O-glycan biosynthesis
lcf00520  Amino sugar and nucleotide sugar metabolism
lcf00524  Neomycin, kanamycin and gentamicin biosynthesis
lcf00531  Glycosaminoglycan degradation
lcf00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lcf00533  Glycosaminoglycan biosynthesis - keratan sulfate
lcf00534  Glycosaminoglycan biosynthesis - heparan sulfate / heparin
lcf00561  Glycerolipid metabolism
lcf00562  Inositol phosphate metabolism
lcf00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
lcf00564  Glycerophospholipid metabolism
lcf00565  Ether lipid metabolism
lcf00590  Arachidonic acid metabolism
lcf00591  Linoleic acid metabolism
lcf00592  alpha-Linolenic acid metabolism
lcf00600  Sphingolipid metabolism
lcf00601  Glycosphingolipid biosynthesis - lacto and neolacto series
lcf00603  Glycosphingolipid biosynthesis - globo and isoglobo series
lcf00604  Glycosphingolipid biosynthesis - ganglio series
lcf00620  Pyruvate metabolism
lcf00630  Glyoxylate and dicarboxylate metabolism
lcf00640  Propanoate metabolism
lcf00650  Butanoate metabolism
lcf00670  One carbon pool by folate
lcf00730  Thiamine metabolism
lcf00740  Riboflavin metabolism
lcf00750  Vitamin B6 metabolism
lcf00760  Nicotinate and nicotinamide metabolism
lcf00770  Pantothenate and CoA biosynthesis
lcf00780  Biotin metabolism
lcf00785  Lipoic acid metabolism
lcf00790  Folate biosynthesis
lcf00830  Retinol metabolism
lcf00860  Porphyrin metabolism
lcf00900  Terpenoid backbone biosynthesis
lcf00910  Nitrogen metabolism
lcf00920  Sulfur metabolism
lcf00980  Metabolism of xenobiotics by cytochrome P450
lcf00982  Drug metabolism - cytochrome P450
lcf00983  Drug metabolism - other enzymes
lcf01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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