PATHWAY: lcic01100 Help Entry lcic01100                   Pathway                                 Name Metabolic pathways - Lysobacter ciconiae Class BRITE hierarchy Pathway map lcic01100   Metabolic pathways Module lcic_M00002   Glycolysis, core module involving three-carbon compounds [PATH:lcic01100] lcic_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lcic01100] lcic_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lcic01100] lcic_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:lcic01100] lcic_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lcic01100] lcic_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lcic01100] lcic_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:lcic01100] lcic_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lcic01100] lcic_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lcic01100] lcic_M00012   Glyoxylate cycle [PATH:lcic01100] lcic_M00015   Proline biosynthesis, glutamate => proline [PATH:lcic01100] lcic_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lcic01100] lcic_M00021   Cysteine biosynthesis, serine => cysteine [PATH:lcic01100] lcic_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lcic01100] lcic_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:lcic01100] lcic_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:lcic01100] lcic_M00026   Histidine biosynthesis, PRPP => histidine [PATH:lcic01100] lcic_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:lcic01100] lcic_M00034   Methionine salvage pathway [PATH:lcic01100] lcic_M00035   Methionine degradation [PATH:lcic01100] lcic_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:lcic01100] lcic_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:lcic01100] lcic_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lcic01100] lcic_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lcic01100] lcic_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lcic01100] lcic_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lcic01100] lcic_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lcic01100] lcic_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lcic01100] lcic_M00063   CMP-KDO biosynthesis [PATH:lcic01100] lcic_M00082   Fatty acid biosynthesis, initiation [PATH:lcic01100] lcic_M00083   Fatty acid biosynthesis, elongation [PATH:lcic01100] lcic_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:lcic01100] lcic_M00087   beta-Oxidation [PATH:lcic01100] lcic_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lcic01100] lcic_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:lcic01100] lcic_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:lcic01100] lcic_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lcic01100] lcic_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:lcic01100] lcic_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:lcic01100] lcic_M00149   Succinate dehydrogenase, prokaryotes [PATH:lcic01100] lcic_M00151   Cytochrome bc1 complex respiratory unit [PATH:lcic01100] lcic_M00156   Cytochrome c oxidase, cbb3-type [PATH:lcic01100] lcic_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:lcic01100] lcic_M00168   CAM (Crassulacean acid metabolism), dark [PATH:lcic01100] lcic_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lcic01100] lcic_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:lcic01100] lcic_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lcic01100] lcic_M00621   Glycine cleavage system [PATH:lcic01100] lcic_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:lcic01100] lcic_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lcic01100] lcic_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lcic01100] lcic_M00970   Proline degradation, proline => glutamate [PATH:lcic01100] Organism Lysobacter ciconiae [GN:lcic] Related pathway lcic00010   Glycolysis / Gluconeogenesis lcic00020   Citrate cycle (TCA cycle) lcic00030   Pentose phosphate pathway lcic00040   Pentose and glucuronate interconversions lcic00051   Fructose and mannose metabolism lcic00052   Galactose metabolism lcic00053   Ascorbate and aldarate metabolism lcic00061   Fatty acid biosynthesis lcic00071   Fatty acid degradation lcic00130   Ubiquinone and other terpenoid-quinone biosynthesis lcic00190   Oxidative phosphorylation lcic00220   Arginine biosynthesis lcic00230   Purine metabolism lcic00240   Pyrimidine metabolism lcic00250   Alanine, aspartate and glutamate metabolism lcic00260   Glycine, serine and threonine metabolism lcic00261   Monobactam biosynthesis lcic00270   Cysteine and methionine metabolism lcic00280   Valine, leucine and isoleucine degradation lcic00290   Valine, leucine and isoleucine biosynthesis lcic00300   Lysine biosynthesis lcic00310   Lysine degradation lcic00330   Arginine and proline metabolism lcic00332   Carbapenem biosynthesis lcic00340   Histidine metabolism lcic00350   Tyrosine metabolism lcic00360   Phenylalanine metabolism lcic00361   Chlorocyclohexane and chlorobenzene degradation lcic00362   Benzoate degradation lcic00364   Fluorobenzoate degradation lcic00380   Tryptophan metabolism lcic00400   Phenylalanine, tyrosine and tryptophan biosynthesis lcic00401   Novobiocin biosynthesis lcic00410   beta-Alanine metabolism lcic00430   Taurine and hypotaurine metabolism lcic00450   Selenocompound metabolism lcic00460   Cyanoamino acid metabolism lcic00470   D-Amino acid metabolism lcic00480   Glutathione metabolism lcic00500   Starch and sucrose metabolism lcic00520   Amino sugar and nucleotide sugar metabolism lcic00521   Streptomycin biosynthesis lcic00523   Polyketide sugar unit biosynthesis lcic00525   Acarbose and validamycin biosynthesis lcic00540   Lipopolysaccharide biosynthesis lcic00541   O-Antigen nucleotide sugar biosynthesis lcic00543   Exopolysaccharide biosynthesis lcic00550   Peptidoglycan biosynthesis lcic00552   Teichoic acid biosynthesis lcic00561   Glycerolipid metabolism lcic00562   Inositol phosphate metabolism lcic00564   Glycerophospholipid metabolism lcic00565   Ether lipid metabolism lcic00592   alpha-Linolenic acid metabolism lcic00620   Pyruvate metabolism lcic00623   Toluene degradation lcic00625   Chloroalkane and chloroalkene degradation lcic00626   Naphthalene degradation lcic00630   Glyoxylate and dicarboxylate metabolism lcic00640   Propanoate metabolism lcic00643   Styrene degradation lcic00650   Butanoate metabolism lcic00660   C5-Branched dibasic acid metabolism lcic00670   One carbon pool by folate lcic00680   Methane metabolism lcic00710   Carbon fixation by Calvin cycle lcic00720   Other carbon fixation pathways lcic00730   Thiamine metabolism lcic00740   Riboflavin metabolism lcic00750   Vitamin B6 metabolism lcic00760   Nicotinate and nicotinamide metabolism lcic00770   Pantothenate and CoA biosynthesis lcic00780   Biotin metabolism lcic00785   Lipoic acid metabolism lcic00790   Folate biosynthesis lcic00860   Porphyrin metabolism lcic00900   Terpenoid backbone biosynthesis lcic00907   Pinene, camphor and geraniol degradation lcic00910   Nitrogen metabolism lcic00920   Sulfur metabolism lcic00930   Caprolactam degradation lcic00999   Biosynthesis of various plant secondary metabolites lcic01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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