KEGG   PATHWAY: lcq04136
Entry
lcq04136                    Pathway                                
Name
Autophagy - other - Lucilia cuprina (Australian sheep blowfly)
Description
Autophagy is a degradative pathway for the removal of cytoplasmic materials in eukaryotic cells, and is characterized by the formation of a double-membrane structure called the autophagosome, either in a housekeeping capacity or during stress and senescence. The process of autophagy could be divided into several stages: induction, vesicle nucleation, elongation and closure, and fusion and digestion. Most essential autophagic machineries are conserved throughout eukaryotes (see map04140 for animals and map04138 for fungi). This map is for other eukaryotes including plants and protists, where autophagy related genes (ATGs) play similar roles in the life cycle. However, autophagy has been relatively less studied in lower eukaryotes.
Class
Cellular Processes; Transport and catabolism
Pathway map
lcq04136  Autophagy - other
lcq04136

Other DBs
GO: 0006914
Organism
Lucilia cuprina (Australian sheep blowfly) [GN:lcq]
Gene
111677467  regulatory-associated protein of mTOR [KO:K07204]
111683351  serine/threonine-protein kinase Tor isoform X1 [KO:K07203] [EC:2.7.11.1]
111691219  protein LST8 homolog [KO:K08266]
111683141  serine/threonine-protein kinase unc-51 [KO:K08269] [EC:2.7.11.1]
111684618  autophagy-related protein 13 homolog [KO:K08331]
111676029  autophagy-related protein 101 [KO:K19730]
111681316  immunoglobulin-binding protein 1 [KO:K17606]
111680733  serine/threonine-protein phosphatase PP2A [KO:K04382] [EC:3.1.3.16]
111679105  autophagy-related protein 9A [KO:K17907]
111680345  autophagy-related protein 2 homolog A [KO:K17906]
111689616  WD repeat domain phosphoinositide-interacting protein 2 isoform X1 [KO:K17908]
111687393  WD repeat domain phosphoinositide-interacting protein 2 isoform X1 [KO:K17908]
111687145  beclin-1-like protein [KO:K08334]
111677355  phosphatidylinositol 3-kinase catalytic subunit type 3 [KO:K00914] [EC:2.7.1.137]
111682634  phosphoinositide 3-kinase regulatory subunit 4 [KO:K08333] [EC:2.7.11.1]
111685366  autophagy protein 12-like [KO:K08336]
111687638  autophagy protein 5 [KO:K08339]
111683416  autophagy-related protein 16 isoform X1 [KO:K17890]
111684868  ubiquitin-like modifier-activating enzyme ATG7 [KO:K08337]
111689686  ubiquitin-like-conjugating enzyme ATG10 [KO:K17888]
111681918  ubiquitin-like-conjugating enzyme ATG3 [KO:K08343]
111685188  gamma-aminobutyric acid receptor-associated protein [KO:K08341]
111679667  cysteine protease ATG4C isoform X1 [KO:K08342] [EC:3.4.22.-]
111680547  cysteine protease ATG4B isoform X1 [KO:K08342] [EC:3.4.22.-]
Compound
C00350  Phosphatidylethanolamine
C01194  1-Phosphatidyl-D-myo-inositol
C04549  1-Phosphatidyl-1D-myo-inositol 3-phosphate
Reference
  Authors
Duszenko M, Ginger ML, Brennand A, Gualdron-Lopez M, Colombo MI, Coombs GH, Coppens I, Jayabalasingham B, Langsley G, de Castro SL, Menna-Barreto R, Mottram JC, Navarro M, Rigden DJ, Romano PS, Stoka V, Turk B, Michels PA
  Title
Autophagy in protists.
  Journal
Autophagy 7:127-58 (2011)
DOI:10.4161/auto.7.2.13310
Reference
  Authors
Avin-Wittenberg T, Honig A, Galili G
  Title
Variations on a theme: plant autophagy in comparison to yeast and mammals.
  Journal
Protoplasma 249:285-99 (2012)
DOI:10.1007/s00709-011-0296-z
Reference
  Authors
Liu Y, Bassham DC
  Title
Autophagy: pathways for self-eating in plant cells.
  Journal
Annu Rev Plant Biol 63:215-37 (2012)
DOI:10.1146/annurev-arplant-042811-105441
Reference
  Authors
Yoshimoto K
  Title
Beginning to understand autophagy, an intracellular self-degradation system in plants.
  Journal
Plant Cell Physiol 53:1355-65 (2012)
DOI:10.1093/pcp/pcs099
Reference
  Authors
Li F, Chung T, Vierstra RD
  Title
AUTOPHAGY-RELATED11 plays a critical role in general autophagy- and senescence-induced mitophagy in Arabidopsis.
  Journal
Plant Cell 26:788-807 (2014)
DOI:10.1105/tpc.113.120014
Reference
  Authors
Michaeli S, Galili G, Genschik P, Fernie AR, Avin-Wittenberg T
  Title
Autophagy in Plants--What's New on the Menu?
  Journal
Trends Plant Sci 21:134-44 (2016)
DOI:10.1016/j.tplants.2015.10.008
Reference
  Authors
Yang X, Bassham DC
  Title
New Insight into the Mechanism and Function of Autophagy in Plant Cells.
  Journal
Int Rev Cell Mol Biol 320:1-40 (2015)
DOI:10.1016/bs.ircmb.2015.07.005
KO pathway
ko04136   
LinkDB

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