PATHWAY: lee01100 Help Entry lee01100                    Pathway                                 Name Metabolic pathways - Leclercia sp. W17 Class BRITE hierarchy Pathway map lee01100   Metabolic pathways Module lee_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lee01100] lee_M00002   Glycolysis, core module involving three-carbon compounds [PATH:lee01100] lee_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lee01100] lee_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lee01100] lee_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:lee01100] lee_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lee01100] lee_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lee01100] lee_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:lee01100] lee_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:lee01100] lee_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lee01100] lee_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lee01100] lee_M00012   Glyoxylate cycle [PATH:lee01100] lee_M00015   Proline biosynthesis, glutamate => proline [PATH:lee01100] lee_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:lee01100] lee_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:lee01100] lee_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lee01100] lee_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lee01100] lee_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:lee01100] lee_M00021   Cysteine biosynthesis, serine => cysteine [PATH:lee01100] lee_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lee01100] lee_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:lee01100] lee_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:lee01100] lee_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:lee01100] lee_M00026   Histidine biosynthesis, PRPP => histidine [PATH:lee01100] lee_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:lee01100] lee_M00034   Methionine salvage pathway [PATH:lee01100] lee_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lee01100] lee_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lee01100] lee_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lee01100] lee_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lee01100] lee_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:lee01100] lee_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lee01100] lee_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lee01100] lee_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:lee01100] lee_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:lee01100] lee_M00063   CMP-KDO biosynthesis [PATH:lee01100] lee_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:lee01100] lee_M00082   Fatty acid biosynthesis, initiation [PATH:lee01100] lee_M00083   Fatty acid biosynthesis, elongation [PATH:lee01100] lee_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:lee01100] lee_M00087   beta-Oxidation [PATH:lee01100] lee_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lee01100] lee_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:lee01100] lee_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lee01100] lee_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:lee01100] lee_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:lee01100] lee_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:lee01100] lee_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:lee01100] lee_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:lee01100] lee_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:lee01100] lee_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:lee01100] lee_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:lee01100] lee_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:lee01100] lee_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:lee01100] lee_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:lee01100] lee_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:lee01100] lee_M00149   Succinate dehydrogenase, prokaryotes [PATH:lee01100] lee_M00150   Fumarate reductase, prokaryotes [PATH:lee01100] lee_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:lee01100] lee_M00168   CAM (Crassulacean acid metabolism), dark [PATH:lee01100] lee_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:lee01100] lee_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lee01100] lee_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:lee01100] lee_M00417   Cytochrome o ubiquinol oxidase [PATH:lee01100] lee_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lee01100] lee_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:lee01100] lee_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:lee01100] lee_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:lee01100] lee_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lee01100] lee_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:lee01100] lee_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:lee01100] lee_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:lee01100] lee_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:lee01100] lee_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:lee01100] lee_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lee01100] lee_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:lee01100] lee_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:lee01100] lee_M00621   Glycine cleavage system [PATH:lee01100] lee_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:lee01100] lee_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:lee01100] lee_M00844   Arginine biosynthesis, ornithine => arginine [PATH:lee01100] lee_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lee01100] lee_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:lee01100] lee_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:lee01100] lee_M00878   Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:lee01100] lee_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:lee01100] lee_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lee01100] lee_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lee01100] lee_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:lee01100] lee_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lee01100] lee_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lee01100] lee_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:lee01100] lee_M00956   Lysine degradation, bacteria, L-lysine => succinate [PATH:lee01100] lee_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:lee01100] lee_M00970   Proline degradation, proline => glutamate [PATH:lee01100] Organism Leclercia sp. W17 [GN:lee] Related pathway lee00010   Glycolysis / Gluconeogenesis lee00020   Citrate cycle (TCA cycle) lee00030   Pentose phosphate pathway lee00040   Pentose and glucuronate interconversions lee00051   Fructose and mannose metabolism lee00052   Galactose metabolism lee00053   Ascorbate and aldarate metabolism lee00061   Fatty acid biosynthesis lee00071   Fatty acid degradation lee00130   Ubiquinone and other terpenoid-quinone biosynthesis lee00190   Oxidative phosphorylation lee00220   Arginine biosynthesis lee00230   Purine metabolism lee00240   Pyrimidine metabolism lee00250   Alanine, aspartate and glutamate metabolism lee00260   Glycine, serine and threonine metabolism lee00261   Monobactam biosynthesis lee00270   Cysteine and methionine metabolism lee00280   Valine, leucine and isoleucine degradation lee00290   Valine, leucine and isoleucine biosynthesis lee00300   Lysine biosynthesis lee00310   Lysine degradation lee00330   Arginine and proline metabolism lee00332   Carbapenem biosynthesis lee00340   Histidine metabolism lee00350   Tyrosine metabolism lee00360   Phenylalanine metabolism lee00361   Chlorocyclohexane and chlorobenzene degradation lee00362   Benzoate degradation lee00364   Fluorobenzoate degradation lee00380   Tryptophan metabolism lee00400   Phenylalanine, tyrosine and tryptophan biosynthesis lee00401   Novobiocin biosynthesis lee00410   beta-Alanine metabolism lee00430   Taurine and hypotaurine metabolism lee00440   Phosphonate and phosphinate metabolism lee00450   Selenocompound metabolism lee00460   Cyanoamino acid metabolism lee00470   D-Amino acid metabolism lee00480   Glutathione metabolism lee00500   Starch and sucrose metabolism lee00511   Other glycan degradation lee00520   Amino sugar and nucleotide sugar metabolism lee00521   Streptomycin biosynthesis lee00523   Polyketide sugar unit biosynthesis lee00525   Acarbose and validamycin biosynthesis lee00540   Lipopolysaccharide biosynthesis lee00541   O-Antigen nucleotide sugar biosynthesis lee00542   O-Antigen repeat unit biosynthesis lee00543   Exopolysaccharide biosynthesis lee00550   Peptidoglycan biosynthesis lee00552   Teichoic acid biosynthesis lee00561   Glycerolipid metabolism lee00562   Inositol phosphate metabolism lee00564   Glycerophospholipid metabolism lee00565   Ether lipid metabolism lee00592   alpha-Linolenic acid metabolism lee00600   Sphingolipid metabolism lee00620   Pyruvate metabolism lee00623   Toluene degradation lee00625   Chloroalkane and chloroalkene degradation lee00626   Naphthalene degradation lee00627   Aminobenzoate degradation lee00630   Glyoxylate and dicarboxylate metabolism lee00633   Nitrotoluene degradation lee00640   Propanoate metabolism lee00643   Styrene degradation lee00650   Butanoate metabolism lee00660   C5-Branched dibasic acid metabolism lee00670   One carbon pool by folate lee00680   Methane metabolism lee00710   Carbon fixation by Calvin cycle lee00720   Other carbon fixation pathways lee00730   Thiamine metabolism lee00740   Riboflavin metabolism lee00750   Vitamin B6 metabolism lee00760   Nicotinate and nicotinamide metabolism lee00770   Pantothenate and CoA biosynthesis lee00780   Biotin metabolism lee00785   Lipoic acid metabolism lee00790   Folate biosynthesis lee00791   Atrazine degradation lee00860   Porphyrin metabolism lee00900   Terpenoid backbone biosynthesis lee00906   Carotenoid biosynthesis lee00907   Pinene, camphor and geraniol degradation lee00910   Nitrogen metabolism lee00920   Sulfur metabolism lee00930   Caprolactam degradation lee00946   Degradation of flavonoids lee00999   Biosynthesis of various plant secondary metabolites lee01040   Biosynthesis of unsaturated fatty acids lee01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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