PATHWAY: lgu01100 Help Entry lgu01100                    Pathway                                 Name Metabolic pathways - Lysobacter gummosus Class BRITE hierarchy Pathway map lgu01100   Metabolic pathways Module lgu_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lgu01100] lgu_M00002   Glycolysis, core module involving three-carbon compounds [PATH:lgu01100] lgu_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lgu01100] lgu_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lgu01100] lgu_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:lgu01100] lgu_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lgu01100] lgu_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lgu01100] lgu_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:lgu01100] lgu_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:lgu01100] lgu_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lgu01100] lgu_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lgu01100] lgu_M00012   Glyoxylate cycle [PATH:lgu01100] lgu_M00015   Proline biosynthesis, glutamate => proline [PATH:lgu01100] lgu_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:lgu01100] lgu_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lgu01100] lgu_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lgu01100] lgu_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lgu01100] lgu_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:lgu01100] lgu_M00026   Histidine biosynthesis, PRPP => histidine [PATH:lgu01100] lgu_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:lgu01100] lgu_M00035   Methionine degradation [PATH:lgu01100] lgu_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:lgu01100] lgu_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lgu01100] lgu_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lgu01100] lgu_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lgu01100] lgu_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lgu01100] lgu_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lgu01100] lgu_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lgu01100] lgu_M00063   CMP-KDO biosynthesis [PATH:lgu01100] lgu_M00082   Fatty acid biosynthesis, initiation [PATH:lgu01100] lgu_M00083   Fatty acid biosynthesis, elongation [PATH:lgu01100] lgu_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:lgu01100] lgu_M00087   beta-Oxidation [PATH:lgu01100] lgu_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:lgu01100] lgu_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lgu01100] lgu_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:lgu01100] lgu_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:lgu01100] lgu_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:lgu01100] lgu_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:lgu01100] lgu_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:lgu01100] lgu_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:lgu01100] lgu_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lgu01100] lgu_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:lgu01100] lgu_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:lgu01100] lgu_M00149   Succinate dehydrogenase, prokaryotes [PATH:lgu01100] lgu_M00151   Cytochrome bc1 complex respiratory unit [PATH:lgu01100] lgu_M00155   Cytochrome c oxidase, prokaryotes [PATH:lgu01100] lgu_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:lgu01100] lgu_M00168   CAM (Crassulacean acid metabolism), dark [PATH:lgu01100] lgu_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:lgu01100] lgu_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lgu01100] lgu_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:lgu01100] lgu_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:lgu01100] lgu_M00417   Cytochrome o ubiquinol oxidase [PATH:lgu01100] lgu_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lgu01100] lgu_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:lgu01100] lgu_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lgu01100] lgu_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:lgu01100] lgu_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lgu01100] lgu_M00621   Glycine cleavage system [PATH:lgu01100] lgu_M00793   dTDP-L-rhamnose biosynthesis [PATH:lgu01100] lgu_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:lgu01100] lgu_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lgu01100] lgu_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lgu01100] lgu_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lgu01100] lgu_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lgu01100] lgu_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lgu01100] lgu_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:lgu01100] lgu_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:lgu01100] lgu_M00970   Proline degradation, proline => glutamate [PATH:lgu01100] Organism Lysobacter gummosus [GN:lgu] Related pathway lgu00010   Glycolysis / Gluconeogenesis lgu00020   Citrate cycle (TCA cycle) lgu00030   Pentose phosphate pathway lgu00040   Pentose and glucuronate interconversions lgu00051   Fructose and mannose metabolism lgu00052   Galactose metabolism lgu00053   Ascorbate and aldarate metabolism lgu00061   Fatty acid biosynthesis lgu00071   Fatty acid degradation lgu00130   Ubiquinone and other terpenoid-quinone biosynthesis lgu00190   Oxidative phosphorylation lgu00220   Arginine biosynthesis lgu00230   Purine metabolism lgu00240   Pyrimidine metabolism lgu00250   Alanine, aspartate and glutamate metabolism lgu00260   Glycine, serine and threonine metabolism lgu00261   Monobactam biosynthesis lgu00270   Cysteine and methionine metabolism lgu00280   Valine, leucine and isoleucine degradation lgu00290   Valine, leucine and isoleucine biosynthesis lgu00300   Lysine biosynthesis lgu00310   Lysine degradation lgu00311   Penicillin and cephalosporin biosynthesis lgu00330   Arginine and proline metabolism lgu00332   Carbapenem biosynthesis lgu00340   Histidine metabolism lgu00350   Tyrosine metabolism lgu00360   Phenylalanine metabolism lgu00361   Chlorocyclohexane and chlorobenzene degradation lgu00362   Benzoate degradation lgu00364   Fluorobenzoate degradation lgu00380   Tryptophan metabolism lgu00400   Phenylalanine, tyrosine and tryptophan biosynthesis lgu00401   Novobiocin biosynthesis lgu00410   beta-Alanine metabolism lgu00430   Taurine and hypotaurine metabolism lgu00440   Phosphonate and phosphinate metabolism lgu00450   Selenocompound metabolism lgu00460   Cyanoamino acid metabolism lgu00470   D-Amino acid metabolism lgu00480   Glutathione metabolism lgu00500   Starch and sucrose metabolism lgu00511   Other glycan degradation lgu00520   Amino sugar and nucleotide sugar metabolism lgu00521   Streptomycin biosynthesis lgu00523   Polyketide sugar unit biosynthesis lgu00525   Acarbose and validamycin biosynthesis lgu00540   Lipopolysaccharide biosynthesis lgu00541   O-Antigen nucleotide sugar biosynthesis lgu00543   Exopolysaccharide biosynthesis lgu00550   Peptidoglycan biosynthesis lgu00552   Teichoic acid biosynthesis lgu00561   Glycerolipid metabolism lgu00562   Inositol phosphate metabolism lgu00564   Glycerophospholipid metabolism lgu00565   Ether lipid metabolism lgu00590   Arachidonic acid metabolism lgu00592   alpha-Linolenic acid metabolism lgu00600   Sphingolipid metabolism lgu00620   Pyruvate metabolism lgu00621   Dioxin degradation lgu00622   Xylene degradation lgu00623   Toluene degradation lgu00625   Chloroalkane and chloroalkene degradation lgu00626   Naphthalene degradation lgu00627   Aminobenzoate degradation lgu00630   Glyoxylate and dicarboxylate metabolism lgu00633   Nitrotoluene degradation lgu00640   Propanoate metabolism lgu00643   Styrene degradation lgu00650   Butanoate metabolism lgu00660   C5-Branched dibasic acid metabolism lgu00670   One carbon pool by folate lgu00680   Methane metabolism lgu00710   Carbon fixation by Calvin cycle lgu00720   Other carbon fixation pathways lgu00730   Thiamine metabolism lgu00740   Riboflavin metabolism lgu00750   Vitamin B6 metabolism lgu00760   Nicotinate and nicotinamide metabolism lgu00770   Pantothenate and CoA biosynthesis lgu00780   Biotin metabolism lgu00785   Lipoic acid metabolism lgu00790   Folate biosynthesis lgu00860   Porphyrin metabolism lgu00900   Terpenoid backbone biosynthesis lgu00906   Carotenoid biosynthesis lgu00907   Pinene, camphor and geraniol degradation lgu00910   Nitrogen metabolism lgu00920   Sulfur metabolism lgu00930   Caprolactam degradation lgu00946   Degradation of flavonoids lgu00999   Biosynthesis of various plant secondary metabolites lgu01040   Biosynthesis of unsaturated fatty acids lgu01053   Biosynthesis of siderophore group nonribosomal peptides lgu01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system