KEGG   PATHWAY: lim01100
Entry
lim01100                    Pathway                                
Name
Metabolic pathways - Limnohabitans sp. 103DPR2
Class
Pathway map
lim01100  Metabolic pathways
lim01100

Module
lim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lim01100]
lim_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lim01100]
lim_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lim01100]
lim_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lim01100]
lim_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lim01100]
lim_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lim01100]
lim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lim01100]
lim_M00012  Glyoxylate cycle [PATH:lim01100]
lim_M00015  Proline biosynthesis, glutamate => proline [PATH:lim01100]
lim_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:lim01100]
lim_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lim01100]
lim_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lim01100]
lim_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lim01100]
lim_M00021  Cysteine biosynthesis, serine => cysteine [PATH:lim01100]
lim_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lim01100]
lim_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:lim01100]
lim_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:lim01100]
lim_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:lim01100]
lim_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:lim01100]
lim_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lim01100]
lim_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lim01100]
lim_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lim01100]
lim_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lim01100]
lim_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lim01100]
lim_M00063  CMP-KDO biosynthesis [PATH:lim01100]
lim_M00082  Fatty acid biosynthesis, initiation [PATH:lim01100]
lim_M00083  Fatty acid biosynthesis, elongation [PATH:lim01100]
lim_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lim01100]
lim_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lim01100]
lim_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:lim01100]
lim_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lim01100]
lim_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:lim01100]
lim_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lim01100]
lim_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:lim01100]
lim_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:lim01100]
lim_M00149  Succinate dehydrogenase, prokaryotes [PATH:lim01100]
lim_M00151  Cytochrome bc1 complex respiratory unit [PATH:lim01100]
lim_M00155  Cytochrome c oxidase, prokaryotes [PATH:lim01100]
lim_M00156  Cytochrome c oxidase, cbb3-type [PATH:lim01100]
lim_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:lim01100]
lim_M00168  CAM (Crassulacean acid metabolism), dark [PATH:lim01100]
lim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lim01100]
lim_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lim01100]
lim_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:lim01100]
lim_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lim01100]
lim_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:lim01100]
lim_M00621  Glycine cleavage system [PATH:lim01100]
lim_M00623  Phthalate degradation, phthalate => protocatechuate [PATH:lim01100]
lim_M00793  dTDP-L-rhamnose biosynthesis [PATH:lim01100]
lim_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lim01100]
lim_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lim01100]
lim_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lim01100]
lim_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lim01100]
lim_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lim01100]
lim_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:lim01100]
lim_M00970  Proline degradation, proline => glutamate [PATH:lim01100]
Organism
Limnohabitans sp. 103DPR2 [GN:lim]
Related
pathway
lim00010  Glycolysis / Gluconeogenesis
lim00020  Citrate cycle (TCA cycle)
lim00030  Pentose phosphate pathway
lim00040  Pentose and glucuronate interconversions
lim00051  Fructose and mannose metabolism
lim00052  Galactose metabolism
lim00053  Ascorbate and aldarate metabolism
lim00061  Fatty acid biosynthesis
lim00071  Fatty acid degradation
lim00130  Ubiquinone and other terpenoid-quinone biosynthesis
lim00190  Oxidative phosphorylation
lim00220  Arginine biosynthesis
lim00230  Purine metabolism
lim00240  Pyrimidine metabolism
lim00250  Alanine, aspartate and glutamate metabolism
lim00260  Glycine, serine and threonine metabolism
lim00261  Monobactam biosynthesis
lim00270  Cysteine and methionine metabolism
lim00280  Valine, leucine and isoleucine degradation
lim00290  Valine, leucine and isoleucine biosynthesis
lim00300  Lysine biosynthesis
lim00310  Lysine degradation
lim00330  Arginine and proline metabolism
lim00332  Carbapenem biosynthesis
lim00340  Histidine metabolism
lim00350  Tyrosine metabolism
lim00360  Phenylalanine metabolism
lim00361  Chlorocyclohexane and chlorobenzene degradation
lim00362  Benzoate degradation
lim00364  Fluorobenzoate degradation
lim00380  Tryptophan metabolism
lim00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lim00401  Novobiocin biosynthesis
lim00405  Phenazine biosynthesis
lim00410  beta-Alanine metabolism
lim00440  Phosphonate and phosphinate metabolism
lim00450  Selenocompound metabolism
lim00460  Cyanoamino acid metabolism
lim00470  D-Amino acid metabolism
lim00480  Glutathione metabolism
lim00500  Starch and sucrose metabolism
lim00520  Amino sugar and nucleotide sugar metabolism
lim00521  Streptomycin biosynthesis
lim00523  Polyketide sugar unit biosynthesis
lim00525  Acarbose and validamycin biosynthesis
lim00540  Lipopolysaccharide biosynthesis
lim00541  O-Antigen nucleotide sugar biosynthesis
lim00543  Exopolysaccharide biosynthesis
lim00550  Peptidoglycan biosynthesis
lim00552  Teichoic acid biosynthesis
lim00561  Glycerolipid metabolism
lim00562  Inositol phosphate metabolism
lim00564  Glycerophospholipid metabolism
lim00620  Pyruvate metabolism
lim00623  Toluene degradation
lim00624  Polycyclic aromatic hydrocarbon degradation
lim00625  Chloroalkane and chloroalkene degradation
lim00626  Naphthalene degradation
lim00627  Aminobenzoate degradation
lim00630  Glyoxylate and dicarboxylate metabolism
lim00633  Nitrotoluene degradation
lim00640  Propanoate metabolism
lim00642  Ethylbenzene degradation
lim00643  Styrene degradation
lim00650  Butanoate metabolism
lim00660  C5-Branched dibasic acid metabolism
lim00670  One carbon pool by folate
lim00680  Methane metabolism
lim00710  Carbon fixation by Calvin cycle
lim00720  Other carbon fixation pathways
lim00730  Thiamine metabolism
lim00740  Riboflavin metabolism
lim00750  Vitamin B6 metabolism
lim00760  Nicotinate and nicotinamide metabolism
lim00770  Pantothenate and CoA biosynthesis
lim00780  Biotin metabolism
lim00785  Lipoic acid metabolism
lim00790  Folate biosynthesis
lim00860  Porphyrin metabolism
lim00900  Terpenoid backbone biosynthesis
lim00906  Carotenoid biosynthesis
lim00907  Pinene, camphor and geraniol degradation
lim00910  Nitrogen metabolism
lim00920  Sulfur metabolism
lim00930  Caprolactam degradation
lim00999  Biosynthesis of various plant secondary metabolites
lim01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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