KEGG   PATHWAY: limn01100
Entry
limn01100                   Pathway                                
Name
Metabolic pathways - Limnobacter sp. SAORIC-580
Class
Pathway map
limn01100  Metabolic pathways
limn01100

Module
limn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:limn01100]
limn_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:limn01100]
limn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:limn01100]
limn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:limn01100]
limn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:limn01100]
limn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:limn01100]
limn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:limn01100]
limn_M00012  Glyoxylate cycle [PATH:limn01100]
limn_M00015  Proline biosynthesis, glutamate => proline [PATH:limn01100]
limn_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:limn01100]
limn_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:limn01100]
limn_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:limn01100]
limn_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:limn01100]
limn_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:limn01100]
limn_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:limn01100]
limn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:limn01100]
limn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:limn01100]
limn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:limn01100]
limn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:limn01100]
limn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:limn01100]
limn_M00063  CMP-KDO biosynthesis [PATH:limn01100]
limn_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:limn01100]
limn_M00082  Fatty acid biosynthesis, initiation [PATH:limn01100]
limn_M00083  Fatty acid biosynthesis, elongation [PATH:limn01100]
limn_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:limn01100]
limn_M00087  beta-Oxidation [PATH:limn01100]
limn_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:limn01100]
limn_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:limn01100]
limn_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:limn01100]
limn_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:limn01100]
limn_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:limn01100]
limn_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:limn01100]
limn_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:limn01100]
limn_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:limn01100]
limn_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:limn01100]
limn_M00149  Succinate dehydrogenase, prokaryotes [PATH:limn01100]
limn_M00151  Cytochrome bc1 complex respiratory unit [PATH:limn01100]
limn_M00155  Cytochrome c oxidase, prokaryotes [PATH:limn01100]
limn_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:limn01100]
limn_M00168  CAM (Crassulacean acid metabolism), dark [PATH:limn01100]
limn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:limn01100]
limn_M00417  Cytochrome o ubiquinol oxidase [PATH:limn01100]
limn_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:limn01100]
limn_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:limn01100]
limn_M00548  Benzene degradation, benzene => catechol [PATH:limn01100]
limn_M00569  Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:limn01100]
limn_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:limn01100]
limn_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:limn01100]
limn_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:limn01100]
limn_M00793  dTDP-L-rhamnose biosynthesis [PATH:limn01100]
limn_M00844  Arginine biosynthesis, ornithine => arginine [PATH:limn01100]
limn_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:limn01100]
limn_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:limn01100]
limn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:limn01100]
limn_M00970  Proline degradation, proline => glutamate [PATH:limn01100]
Organism
Limnobacter sp. SAORIC-580 [GN:limn]
Related
pathway
limn00010  Glycolysis / Gluconeogenesis
limn00020  Citrate cycle (TCA cycle)
limn00030  Pentose phosphate pathway
limn00040  Pentose and glucuronate interconversions
limn00051  Fructose and mannose metabolism
limn00052  Galactose metabolism
limn00053  Ascorbate and aldarate metabolism
limn00061  Fatty acid biosynthesis
limn00062  Fatty acid elongation
limn00071  Fatty acid degradation
limn00130  Ubiquinone and other terpenoid-quinone biosynthesis
limn00190  Oxidative phosphorylation
limn00220  Arginine biosynthesis
limn00230  Purine metabolism
limn00240  Pyrimidine metabolism
limn00250  Alanine, aspartate and glutamate metabolism
limn00260  Glycine, serine and threonine metabolism
limn00261  Monobactam biosynthesis
limn00270  Cysteine and methionine metabolism
limn00280  Valine, leucine and isoleucine degradation
limn00290  Valine, leucine and isoleucine biosynthesis
limn00300  Lysine biosynthesis
limn00310  Lysine degradation
limn00330  Arginine and proline metabolism
limn00332  Carbapenem biosynthesis
limn00340  Histidine metabolism
limn00350  Tyrosine metabolism
limn00360  Phenylalanine metabolism
limn00361  Chlorocyclohexane and chlorobenzene degradation
limn00362  Benzoate degradation
limn00364  Fluorobenzoate degradation
limn00380  Tryptophan metabolism
limn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
limn00401  Novobiocin biosynthesis
limn00410  beta-Alanine metabolism
limn00450  Selenocompound metabolism
limn00460  Cyanoamino acid metabolism
limn00470  D-Amino acid metabolism
limn00480  Glutathione metabolism
limn00500  Starch and sucrose metabolism
limn00520  Amino sugar and nucleotide sugar metabolism
limn00521  Streptomycin biosynthesis
limn00523  Polyketide sugar unit biosynthesis
limn00525  Acarbose and validamycin biosynthesis
limn00540  Lipopolysaccharide biosynthesis
limn00541  O-Antigen nucleotide sugar biosynthesis
limn00543  Exopolysaccharide biosynthesis
limn00550  Peptidoglycan biosynthesis
limn00552  Teichoic acid biosynthesis
limn00561  Glycerolipid metabolism
limn00562  Inositol phosphate metabolism
limn00564  Glycerophospholipid metabolism
limn00565  Ether lipid metabolism
limn00592  alpha-Linolenic acid metabolism
limn00600  Sphingolipid metabolism
limn00620  Pyruvate metabolism
limn00621  Dioxin degradation
limn00622  Xylene degradation
limn00623  Toluene degradation
limn00625  Chloroalkane and chloroalkene degradation
limn00626  Naphthalene degradation
limn00627  Aminobenzoate degradation
limn00630  Glyoxylate and dicarboxylate metabolism
limn00633  Nitrotoluene degradation
limn00640  Propanoate metabolism
limn00643  Styrene degradation
limn00650  Butanoate metabolism
limn00660  C5-Branched dibasic acid metabolism
limn00670  One carbon pool by folate
limn00680  Methane metabolism
limn00710  Carbon fixation by Calvin cycle
limn00720  Other carbon fixation pathways
limn00730  Thiamine metabolism
limn00740  Riboflavin metabolism
limn00750  Vitamin B6 metabolism
limn00760  Nicotinate and nicotinamide metabolism
limn00770  Pantothenate and CoA biosynthesis
limn00780  Biotin metabolism
limn00785  Lipoic acid metabolism
limn00790  Folate biosynthesis
limn00860  Porphyrin metabolism
limn00900  Terpenoid backbone biosynthesis
limn00903  Limonene degradation
limn00906  Carotenoid biosynthesis
limn00907  Pinene, camphor and geraniol degradation
limn00910  Nitrogen metabolism
limn00920  Sulfur metabolism
limn00930  Caprolactam degradation
limn00999  Biosynthesis of various plant secondary metabolites
limn01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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