KEGG   PATHWAY: lmd01100
Entry
lmd01100                    Pathway                                
Name
Metabolic pathways - Leisingera methylohalidivorans
Class
Pathway map
lmd01100  Metabolic pathways
lmd01100

Module
lmd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lmd01100]
lmd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lmd01100]
lmd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lmd01100]
lmd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lmd01100]
lmd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lmd01100]
lmd_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:lmd01100]
lmd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lmd01100]
lmd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lmd01100]
lmd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lmd01100]
lmd_M00015  Proline biosynthesis, glutamate => proline [PATH:lmd01100]
lmd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:lmd01100]
lmd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lmd01100]
lmd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lmd01100]
lmd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:lmd01100]
lmd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lmd01100]
lmd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:lmd01100]
lmd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:lmd01100]
lmd_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:lmd01100]
lmd_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:lmd01100]
lmd_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lmd01100]
lmd_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lmd01100]
lmd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lmd01100]
lmd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lmd01100]
lmd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lmd01100]
lmd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lmd01100]
lmd_M00082  Fatty acid biosynthesis, initiation [PATH:lmd01100]
lmd_M00083  Fatty acid biosynthesis, elongation [PATH:lmd01100]
lmd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lmd01100]
lmd_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:lmd01100]
lmd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lmd01100]
lmd_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:lmd01100]
lmd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lmd01100]
lmd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:lmd01100]
lmd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lmd01100]
lmd_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:lmd01100]
lmd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:lmd01100]
lmd_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:lmd01100]
lmd_M00140  C1-unit interconversion, prokaryotes [PATH:lmd01100]
lmd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:lmd01100]
lmd_M00149  Succinate dehydrogenase, prokaryotes [PATH:lmd01100]
lmd_M00151  Cytochrome bc1 complex respiratory unit [PATH:lmd01100]
lmd_M00155  Cytochrome c oxidase, prokaryotes [PATH:lmd01100]
lmd_M00156  Cytochrome c oxidase, cbb3-type [PATH:lmd01100]
lmd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:lmd01100]
lmd_M00168  CAM (Crassulacean acid metabolism), dark [PATH:lmd01100]
lmd_M00169  CAM (Crassulacean acid metabolism), light [PATH:lmd01100]
lmd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lmd01100]
lmd_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:lmd01100]
lmd_M00373  Ethylmalonyl pathway [PATH:lmd01100]
lmd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lmd01100]
lmd_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:lmd01100]
lmd_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lmd01100]
lmd_M00555  Betaine biosynthesis, choline => betaine [PATH:lmd01100]
lmd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lmd01100]
lmd_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:lmd01100]
lmd_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:lmd01100]
lmd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:lmd01100]
lmd_M00793  dTDP-L-rhamnose biosynthesis [PATH:lmd01100]
lmd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lmd01100]
lmd_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lmd01100]
lmd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lmd01100]
lmd_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lmd01100]
lmd_M00919  Ectoine degradation, ectoine => aspartate [PATH:lmd01100]
lmd_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:lmd01100]
lmd_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:lmd01100]
lmd_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:lmd01100]
lmd_M00970  Proline degradation, proline => glutamate [PATH:lmd01100]
Organism
Leisingera methylohalidivorans [GN:lmd]
Related
pathway
lmd00010  Glycolysis / Gluconeogenesis
lmd00020  Citrate cycle (TCA cycle)
lmd00030  Pentose phosphate pathway
lmd00040  Pentose and glucuronate interconversions
lmd00051  Fructose and mannose metabolism
lmd00052  Galactose metabolism
lmd00053  Ascorbate and aldarate metabolism
lmd00061  Fatty acid biosynthesis
lmd00071  Fatty acid degradation
lmd00121  Secondary bile acid biosynthesis
lmd00130  Ubiquinone and other terpenoid-quinone biosynthesis
lmd00190  Oxidative phosphorylation
lmd00220  Arginine biosynthesis
lmd00230  Purine metabolism
lmd00240  Pyrimidine metabolism
lmd00250  Alanine, aspartate and glutamate metabolism
lmd00260  Glycine, serine and threonine metabolism
lmd00261  Monobactam biosynthesis
lmd00270  Cysteine and methionine metabolism
lmd00280  Valine, leucine and isoleucine degradation
lmd00290  Valine, leucine and isoleucine biosynthesis
lmd00300  Lysine biosynthesis
lmd00310  Lysine degradation
lmd00330  Arginine and proline metabolism
lmd00332  Carbapenem biosynthesis
lmd00340  Histidine metabolism
lmd00350  Tyrosine metabolism
lmd00360  Phenylalanine metabolism
lmd00361  Chlorocyclohexane and chlorobenzene degradation
lmd00362  Benzoate degradation
lmd00364  Fluorobenzoate degradation
lmd00380  Tryptophan metabolism
lmd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lmd00401  Novobiocin biosynthesis
lmd00405  Phenazine biosynthesis
lmd00410  beta-Alanine metabolism
lmd00430  Taurine and hypotaurine metabolism
lmd00440  Phosphonate and phosphinate metabolism
lmd00450  Selenocompound metabolism
lmd00460  Cyanoamino acid metabolism
lmd00470  D-Amino acid metabolism
lmd00480  Glutathione metabolism
lmd00500  Starch and sucrose metabolism
lmd00520  Amino sugar and nucleotide sugar metabolism
lmd00521  Streptomycin biosynthesis
lmd00523  Polyketide sugar unit biosynthesis
lmd00525  Acarbose and validamycin biosynthesis
lmd00540  Lipopolysaccharide biosynthesis
lmd00541  O-Antigen nucleotide sugar biosynthesis
lmd00543  Exopolysaccharide biosynthesis
lmd00550  Peptidoglycan biosynthesis
lmd00552  Teichoic acid biosynthesis
lmd00561  Glycerolipid metabolism
lmd00562  Inositol phosphate metabolism
lmd00564  Glycerophospholipid metabolism
lmd00620  Pyruvate metabolism
lmd00623  Toluene degradation
lmd00625  Chloroalkane and chloroalkene degradation
lmd00626  Naphthalene degradation
lmd00627  Aminobenzoate degradation
lmd00630  Glyoxylate and dicarboxylate metabolism
lmd00633  Nitrotoluene degradation
lmd00640  Propanoate metabolism
lmd00643  Styrene degradation
lmd00650  Butanoate metabolism
lmd00660  C5-Branched dibasic acid metabolism
lmd00670  One carbon pool by folate
lmd00680  Methane metabolism
lmd00710  Carbon fixation by Calvin cycle
lmd00720  Other carbon fixation pathways
lmd00730  Thiamine metabolism
lmd00740  Riboflavin metabolism
lmd00750  Vitamin B6 metabolism
lmd00760  Nicotinate and nicotinamide metabolism
lmd00770  Pantothenate and CoA biosynthesis
lmd00780  Biotin metabolism
lmd00785  Lipoic acid metabolism
lmd00790  Folate biosynthesis
lmd00860  Porphyrin metabolism
lmd00900  Terpenoid backbone biosynthesis
lmd00903  Limonene degradation
lmd00906  Carotenoid biosynthesis
lmd00907  Pinene, camphor and geraniol degradation
lmd00910  Nitrogen metabolism
lmd00920  Sulfur metabolism
lmd00930  Caprolactam degradation
lmd00999  Biosynthesis of various plant secondary metabolites
lmd01040  Biosynthesis of unsaturated fatty acids
lmd01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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