PATHWAY: lya01100 Help Entry lya01100                    Pathway                                 Name Metabolic pathways - Lysobacter yananisis Class BRITE hierarchy Pathway map lya01100   Metabolic pathways Module lya_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lya01100] lya_M00002   Glycolysis, core module involving three-carbon compounds [PATH:lya01100] lya_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lya01100] lya_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:lya01100] lya_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:lya01100] lya_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:lya01100] lya_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lya01100] lya_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:lya01100] lya_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:lya01100] lya_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lya01100] lya_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lya01100] lya_M00012   Glyoxylate cycle [PATH:lya01100] lya_M00015   Proline biosynthesis, glutamate => proline [PATH:lya01100] lya_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:lya01100] lya_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:lya01100] lya_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lya01100] lya_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lya01100] lya_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lya01100] lya_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:lya01100] lya_M00026   Histidine biosynthesis, PRPP => histidine [PATH:lya01100] lya_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:lya01100] lya_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:lya01100] lya_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lya01100] lya_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lya01100] lya_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lya01100] lya_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lya01100] lya_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lya01100] lya_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lya01100] lya_M00063   CMP-KDO biosynthesis [PATH:lya01100] lya_M00082   Fatty acid biosynthesis, initiation [PATH:lya01100] lya_M00083   Fatty acid biosynthesis, elongation [PATH:lya01100] lya_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:lya01100] lya_M00087   beta-Oxidation [PATH:lya01100] lya_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:lya01100] lya_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lya01100] lya_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:lya01100] lya_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:lya01100] lya_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:lya01100] lya_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lya01100] lya_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:lya01100] lya_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:lya01100] lya_M00149   Succinate dehydrogenase, prokaryotes [PATH:lya01100] lya_M00151   Cytochrome bc1 complex respiratory unit [PATH:lya01100] lya_M00155   Cytochrome c oxidase, prokaryotes [PATH:lya01100] lya_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:lya01100] lya_M00168   CAM (Crassulacean acid metabolism), dark [PATH:lya01100] lya_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:lya01100] lya_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lya01100] lya_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:lya01100] lya_M00417   Cytochrome o ubiquinol oxidase [PATH:lya01100] lya_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lya01100] lya_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:lya01100] lya_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lya01100] lya_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lya01100] lya_M00621   Glycine cleavage system [PATH:lya01100] lya_M00793   dTDP-L-rhamnose biosynthesis [PATH:lya01100] lya_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:lya01100] lya_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lya01100] lya_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lya01100] lya_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lya01100] lya_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lya01100] lya_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lya01100] lya_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:lya01100] lya_M00970   Proline degradation, proline => glutamate [PATH:lya01100] Organism Lysobacter yananisis [GN:lya] Related pathway lya00010   Glycolysis / Gluconeogenesis lya00020   Citrate cycle (TCA cycle) lya00030   Pentose phosphate pathway lya00040   Pentose and glucuronate interconversions lya00051   Fructose and mannose metabolism lya00052   Galactose metabolism lya00053   Ascorbate and aldarate metabolism lya00061   Fatty acid biosynthesis lya00071   Fatty acid degradation lya00121   Secondary bile acid biosynthesis lya00130   Ubiquinone and other terpenoid-quinone biosynthesis lya00190   Oxidative phosphorylation lya00220   Arginine biosynthesis lya00230   Purine metabolism lya00240   Pyrimidine metabolism lya00250   Alanine, aspartate and glutamate metabolism lya00260   Glycine, serine and threonine metabolism lya00261   Monobactam biosynthesis lya00270   Cysteine and methionine metabolism lya00280   Valine, leucine and isoleucine degradation lya00290   Valine, leucine and isoleucine biosynthesis lya00300   Lysine biosynthesis lya00310   Lysine degradation lya00311   Penicillin and cephalosporin biosynthesis lya00330   Arginine and proline metabolism lya00332   Carbapenem biosynthesis lya00340   Histidine metabolism lya00350   Tyrosine metabolism lya00360   Phenylalanine metabolism lya00361   Chlorocyclohexane and chlorobenzene degradation lya00362   Benzoate degradation lya00364   Fluorobenzoate degradation lya00380   Tryptophan metabolism lya00400   Phenylalanine, tyrosine and tryptophan biosynthesis lya00401   Novobiocin biosynthesis lya00410   beta-Alanine metabolism lya00430   Taurine and hypotaurine metabolism lya00450   Selenocompound metabolism lya00460   Cyanoamino acid metabolism lya00470   D-Amino acid metabolism lya00480   Glutathione metabolism lya00500   Starch and sucrose metabolism lya00511   Other glycan degradation lya00520   Amino sugar and nucleotide sugar metabolism lya00521   Streptomycin biosynthesis lya00523   Polyketide sugar unit biosynthesis lya00525   Acarbose and validamycin biosynthesis lya00540   Lipopolysaccharide biosynthesis lya00541   O-Antigen nucleotide sugar biosynthesis lya00543   Exopolysaccharide biosynthesis lya00550   Peptidoglycan biosynthesis lya00552   Teichoic acid biosynthesis lya00561   Glycerolipid metabolism lya00562   Inositol phosphate metabolism lya00564   Glycerophospholipid metabolism lya00565   Ether lipid metabolism lya00590   Arachidonic acid metabolism lya00592   alpha-Linolenic acid metabolism lya00600   Sphingolipid metabolism lya00620   Pyruvate metabolism lya00622   Xylene degradation lya00623   Toluene degradation lya00625   Chloroalkane and chloroalkene degradation lya00626   Naphthalene degradation lya00627   Aminobenzoate degradation lya00630   Glyoxylate and dicarboxylate metabolism lya00633   Nitrotoluene degradation lya00640   Propanoate metabolism lya00643   Styrene degradation lya00650   Butanoate metabolism lya00660   C5-Branched dibasic acid metabolism lya00670   One carbon pool by folate lya00680   Methane metabolism lya00710   Carbon fixation by Calvin cycle lya00720   Other carbon fixation pathways lya00730   Thiamine metabolism lya00740   Riboflavin metabolism lya00750   Vitamin B6 metabolism lya00760   Nicotinate and nicotinamide metabolism lya00770   Pantothenate and CoA biosynthesis lya00780   Biotin metabolism lya00785   Lipoic acid metabolism lya00790   Folate biosynthesis lya00860   Porphyrin metabolism lya00900   Terpenoid backbone biosynthesis lya00907   Pinene, camphor and geraniol degradation lya00910   Nitrogen metabolism lya00920   Sulfur metabolism lya00930   Caprolactam degradation lya00946   Degradation of flavonoids lya00997   Biosynthesis of various other secondary metabolites lya00999   Biosynthesis of various plant secondary metabolites lya01040   Biosynthesis of unsaturated fatty acids lya01053   Biosynthesis of siderophore group nonribosomal peptides lya01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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