KEGG   PATHWAY: lyp01100
Entry
lyp01100                    Pathway                                
Name
Metabolic pathways - Lysinibacillus sp. PLM2
Class
Pathway map
lyp01100  Metabolic pathways
lyp01100

Module
lyp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lyp01100]
lyp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lyp01100]
lyp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lyp01100]
lyp_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lyp01100]
lyp_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lyp01100]
lyp_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lyp01100]
lyp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lyp01100]
lyp_M00012  Glyoxylate cycle [PATH:lyp01100]
lyp_M00015  Proline biosynthesis, glutamate => proline [PATH:lyp01100]
lyp_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:lyp01100]
lyp_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lyp01100]
lyp_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:lyp01100]
lyp_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lyp01100]
lyp_M00021  Cysteine biosynthesis, serine => cysteine [PATH:lyp01100]
lyp_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lyp01100]
lyp_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:lyp01100]
lyp_M00026  Histidine biosynthesis, PRPP => histidine [PATH:lyp01100]
lyp_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:lyp01100]
lyp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lyp01100]
lyp_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lyp01100]
lyp_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lyp01100]
lyp_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lyp01100]
lyp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lyp01100]
lyp_M00082  Fatty acid biosynthesis, initiation [PATH:lyp01100]
lyp_M00083  Fatty acid biosynthesis, elongation [PATH:lyp01100]
lyp_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lyp01100]
lyp_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:lyp01100]
lyp_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lyp01100]
lyp_M00151  Cytochrome bc1 complex respiratory unit [PATH:lyp01100]
lyp_M00155  Cytochrome c oxidase, prokaryotes [PATH:lyp01100]
lyp_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:lyp01100]
lyp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lyp01100]
lyp_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:lyp01100]
lyp_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lyp01100]
lyp_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:lyp01100]
lyp_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:lyp01100]
lyp_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:lyp01100]
lyp_M00621  Glycine cleavage system [PATH:lyp01100]
lyp_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lyp01100]
lyp_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lyp01100]
lyp_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:lyp01100]
lyp_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:lyp01100]
lyp_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:lyp01100]
lyp_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:lyp01100]
lyp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lyp01100]
lyp_M00970  Proline degradation, proline => glutamate [PATH:lyp01100]
lyp_M00972  Proline metabolism [PATH:lyp01100]
Organism
Lysinibacillus sp. PLM2 [GN:lyp]
Related
pathway
lyp00010  Glycolysis / Gluconeogenesis
lyp00020  Citrate cycle (TCA cycle)
lyp00030  Pentose phosphate pathway
lyp00040  Pentose and glucuronate interconversions
lyp00051  Fructose and mannose metabolism
lyp00052  Galactose metabolism
lyp00053  Ascorbate and aldarate metabolism
lyp00061  Fatty acid biosynthesis
lyp00071  Fatty acid degradation
lyp00074  Mycolic acid biosynthesis
lyp00100  Steroid biosynthesis
lyp00130  Ubiquinone and other terpenoid-quinone biosynthesis
lyp00190  Oxidative phosphorylation
lyp00220  Arginine biosynthesis
lyp00230  Purine metabolism
lyp00240  Pyrimidine metabolism
lyp00250  Alanine, aspartate and glutamate metabolism
lyp00260  Glycine, serine and threonine metabolism
lyp00261  Monobactam biosynthesis
lyp00270  Cysteine and methionine metabolism
lyp00280  Valine, leucine and isoleucine degradation
lyp00290  Valine, leucine and isoleucine biosynthesis
lyp00300  Lysine biosynthesis
lyp00310  Lysine degradation
lyp00311  Penicillin and cephalosporin biosynthesis
lyp00330  Arginine and proline metabolism
lyp00332  Carbapenem biosynthesis
lyp00340  Histidine metabolism
lyp00350  Tyrosine metabolism
lyp00360  Phenylalanine metabolism
lyp00361  Chlorocyclohexane and chlorobenzene degradation
lyp00362  Benzoate degradation
lyp00380  Tryptophan metabolism
lyp00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lyp00401  Novobiocin biosynthesis
lyp00410  beta-Alanine metabolism
lyp00430  Taurine and hypotaurine metabolism
lyp00440  Phosphonate and phosphinate metabolism
lyp00450  Selenocompound metabolism
lyp00460  Cyanoamino acid metabolism
lyp00470  D-Amino acid metabolism
lyp00480  Glutathione metabolism
lyp00500  Starch and sucrose metabolism
lyp00520  Amino sugar and nucleotide sugar metabolism
lyp00521  Streptomycin biosynthesis
lyp00540  Lipopolysaccharide biosynthesis
lyp00541  O-Antigen nucleotide sugar biosynthesis
lyp00542  O-Antigen repeat unit biosynthesis
lyp00543  Exopolysaccharide biosynthesis
lyp00550  Peptidoglycan biosynthesis
lyp00552  Teichoic acid biosynthesis
lyp00561  Glycerolipid metabolism
lyp00562  Inositol phosphate metabolism
lyp00564  Glycerophospholipid metabolism
lyp00592  alpha-Linolenic acid metabolism
lyp00620  Pyruvate metabolism
lyp00622  Xylene degradation
lyp00625  Chloroalkane and chloroalkene degradation
lyp00626  Naphthalene degradation
lyp00627  Aminobenzoate degradation
lyp00630  Glyoxylate and dicarboxylate metabolism
lyp00640  Propanoate metabolism
lyp00643  Styrene degradation
lyp00650  Butanoate metabolism
lyp00660  C5-Branched dibasic acid metabolism
lyp00670  One carbon pool by folate
lyp00680  Methane metabolism
lyp00710  Carbon fixation by Calvin cycle
lyp00720  Other carbon fixation pathways
lyp00730  Thiamine metabolism
lyp00740  Riboflavin metabolism
lyp00750  Vitamin B6 metabolism
lyp00760  Nicotinate and nicotinamide metabolism
lyp00770  Pantothenate and CoA biosynthesis
lyp00780  Biotin metabolism
lyp00785  Lipoic acid metabolism
lyp00790  Folate biosynthesis
lyp00860  Porphyrin metabolism
lyp00900  Terpenoid backbone biosynthesis
lyp00907  Pinene, camphor and geraniol degradation
lyp00909  Sesquiterpenoid and triterpenoid biosynthesis
lyp00910  Nitrogen metabolism
lyp00920  Sulfur metabolism
lyp00946  Degradation of flavonoids
lyp00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

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