KEGG   PATHWAY: lys01100
Entry
lys01100                    Pathway                                
Name
Metabolic pathways - Lysinibacillus sp. YS11
Class
Pathway map
lys01100  Metabolic pathways
lys01100

Module
lys_M00002  Glycolysis, core module involving three-carbon compounds [PATH:lys01100]
lys_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lys01100]
lys_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:lys01100]
lys_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lys01100]
lys_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:lys01100]
lys_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lys01100]
lys_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lys01100]
lys_M00012  Glyoxylate cycle [PATH:lys01100]
lys_M00015  Proline biosynthesis, glutamate => proline [PATH:lys01100]
lys_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:lys01100]
lys_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lys01100]
lys_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:lys01100]
lys_M00021  Cysteine biosynthesis, serine => cysteine [PATH:lys01100]
lys_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lys01100]
lys_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:lys01100]
lys_M00026  Histidine biosynthesis, PRPP => histidine [PATH:lys01100]
lys_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:lys01100]
lys_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lys01100]
lys_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:lys01100]
lys_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lys01100]
lys_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lys01100]
lys_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lys01100]
lys_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lys01100]
lys_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lys01100]
lys_M00082  Fatty acid biosynthesis, initiation [PATH:lys01100]
lys_M00083  Fatty acid biosynthesis, elongation [PATH:lys01100]
lys_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:lys01100]
lys_M00087  beta-Oxidation [PATH:lys01100]
lys_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lys01100]
lys_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:lys01100]
lys_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:lys01100]
lys_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:lys01100]
lys_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lys01100]
lys_M00140  C1-unit interconversion, prokaryotes [PATH:lys01100]
lys_M00151  Cytochrome bc1 complex respiratory unit [PATH:lys01100]
lys_M00155  Cytochrome c oxidase, prokaryotes [PATH:lys01100]
lys_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:lys01100]
lys_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:lys01100]
lys_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lys01100]
lys_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:lys01100]
lys_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:lys01100]
lys_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:lys01100]
lys_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:lys01100]
lys_M00621  Glycine cleavage system [PATH:lys01100]
lys_M00844  Arginine biosynthesis, ornithine => arginine [PATH:lys01100]
lys_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lys01100]
lys_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:lys01100]
lys_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:lys01100]
lys_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:lys01100]
lys_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:lys01100]
lys_M00970  Proline degradation, proline => glutamate [PATH:lys01100]
lys_M00972  Proline metabolism [PATH:lys01100]
Organism
Lysinibacillus sp. YS11 [GN:lys]
Related
pathway
lys00010  Glycolysis / Gluconeogenesis
lys00020  Citrate cycle (TCA cycle)
lys00030  Pentose phosphate pathway
lys00040  Pentose and glucuronate interconversions
lys00051  Fructose and mannose metabolism
lys00052  Galactose metabolism
lys00053  Ascorbate and aldarate metabolism
lys00061  Fatty acid biosynthesis
lys00062  Fatty acid elongation
lys00071  Fatty acid degradation
lys00074  Mycolic acid biosynthesis
lys00100  Steroid biosynthesis
lys00130  Ubiquinone and other terpenoid-quinone biosynthesis
lys00190  Oxidative phosphorylation
lys00220  Arginine biosynthesis
lys00230  Purine metabolism
lys00240  Pyrimidine metabolism
lys00250  Alanine, aspartate and glutamate metabolism
lys00260  Glycine, serine and threonine metabolism
lys00261  Monobactam biosynthesis
lys00270  Cysteine and methionine metabolism
lys00280  Valine, leucine and isoleucine degradation
lys00290  Valine, leucine and isoleucine biosynthesis
lys00300  Lysine biosynthesis
lys00310  Lysine degradation
lys00311  Penicillin and cephalosporin biosynthesis
lys00330  Arginine and proline metabolism
lys00332  Carbapenem biosynthesis
lys00340  Histidine metabolism
lys00350  Tyrosine metabolism
lys00360  Phenylalanine metabolism
lys00361  Chlorocyclohexane and chlorobenzene degradation
lys00362  Benzoate degradation
lys00380  Tryptophan metabolism
lys00400  Phenylalanine, tyrosine and tryptophan biosynthesis
lys00401  Novobiocin biosynthesis
lys00405  Phenazine biosynthesis
lys00410  beta-Alanine metabolism
lys00430  Taurine and hypotaurine metabolism
lys00440  Phosphonate and phosphinate metabolism
lys00450  Selenocompound metabolism
lys00460  Cyanoamino acid metabolism
lys00470  D-Amino acid metabolism
lys00480  Glutathione metabolism
lys00500  Starch and sucrose metabolism
lys00520  Amino sugar and nucleotide sugar metabolism
lys00521  Streptomycin biosynthesis
lys00540  Lipopolysaccharide biosynthesis
lys00541  O-Antigen nucleotide sugar biosynthesis
lys00542  O-Antigen repeat unit biosynthesis
lys00543  Exopolysaccharide biosynthesis
lys00550  Peptidoglycan biosynthesis
lys00552  Teichoic acid biosynthesis
lys00561  Glycerolipid metabolism
lys00562  Inositol phosphate metabolism
lys00564  Glycerophospholipid metabolism
lys00592  alpha-Linolenic acid metabolism
lys00620  Pyruvate metabolism
lys00622  Xylene degradation
lys00625  Chloroalkane and chloroalkene degradation
lys00626  Naphthalene degradation
lys00627  Aminobenzoate degradation
lys00630  Glyoxylate and dicarboxylate metabolism
lys00640  Propanoate metabolism
lys00643  Styrene degradation
lys00650  Butanoate metabolism
lys00660  C5-Branched dibasic acid metabolism
lys00670  One carbon pool by folate
lys00680  Methane metabolism
lys00710  Carbon fixation by Calvin cycle
lys00720  Other carbon fixation pathways
lys00730  Thiamine metabolism
lys00740  Riboflavin metabolism
lys00750  Vitamin B6 metabolism
lys00760  Nicotinate and nicotinamide metabolism
lys00770  Pantothenate and CoA biosynthesis
lys00780  Biotin metabolism
lys00785  Lipoic acid metabolism
lys00790  Folate biosynthesis
lys00860  Porphyrin metabolism
lys00900  Terpenoid backbone biosynthesis
lys00907  Pinene, camphor and geraniol degradation
lys00909  Sesquiterpenoid and triterpenoid biosynthesis
lys00910  Nitrogen metabolism
lys00920  Sulfur metabolism
lys00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

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