PATHWAY: lyt01100 Help Entry lyt01100                    Pathway                                 Name Metabolic pathways - Lysobacter sp. TY2-98 Class BRITE hierarchy Pathway map lyt01100   Metabolic pathways Module lyt_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:lyt01100] lyt_M00002   Glycolysis, core module involving three-carbon compounds [PATH:lyt01100] lyt_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:lyt01100] lyt_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:lyt01100] lyt_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:lyt01100] lyt_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:lyt01100] lyt_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:lyt01100] lyt_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:lyt01100] lyt_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:lyt01100] lyt_M00012   Glyoxylate cycle [PATH:lyt01100] lyt_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:lyt01100] lyt_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:lyt01100] lyt_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:lyt01100] lyt_M00026   Histidine biosynthesis, PRPP => histidine [PATH:lyt01100] lyt_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:lyt01100] lyt_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:lyt01100] lyt_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:lyt01100] lyt_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:lyt01100] lyt_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:lyt01100] lyt_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:lyt01100] lyt_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lyt01100] lyt_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lyt01100] lyt_M00063   CMP-KDO biosynthesis [PATH:lyt01100] lyt_M00082   Fatty acid biosynthesis, initiation [PATH:lyt01100] lyt_M00083   Fatty acid biosynthesis, elongation [PATH:lyt01100] lyt_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:lyt01100] lyt_M00087   beta-Oxidation [PATH:lyt01100] lyt_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:lyt01100] lyt_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:lyt01100] lyt_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:lyt01100] lyt_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:lyt01100] lyt_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:lyt01100] lyt_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:lyt01100] lyt_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:lyt01100] lyt_M00149   Succinate dehydrogenase, prokaryotes [PATH:lyt01100] lyt_M00151   Cytochrome bc1 complex respiratory unit [PATH:lyt01100] lyt_M00155   Cytochrome c oxidase, prokaryotes [PATH:lyt01100] lyt_M00156   Cytochrome c oxidase, cbb3-type [PATH:lyt01100] lyt_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:lyt01100] lyt_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:lyt01100] lyt_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:lyt01100] lyt_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:lyt01100] lyt_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:lyt01100] lyt_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:lyt01100] lyt_M00621   Glycine cleavage system [PATH:lyt01100] lyt_M00793   dTDP-L-rhamnose biosynthesis [PATH:lyt01100] lyt_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:lyt01100] lyt_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:lyt01100] lyt_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:lyt01100] lyt_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:lyt01100] lyt_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lyt01100] lyt_M00970   Proline degradation, proline => glutamate [PATH:lyt01100] Organism Lysobacter sp. TY2-98 [GN:lyt] Related pathway lyt00010   Glycolysis / Gluconeogenesis lyt00020   Citrate cycle (TCA cycle) lyt00030   Pentose phosphate pathway lyt00040   Pentose and glucuronate interconversions lyt00051   Fructose and mannose metabolism lyt00052   Galactose metabolism lyt00053   Ascorbate and aldarate metabolism lyt00061   Fatty acid biosynthesis lyt00071   Fatty acid degradation lyt00130   Ubiquinone and other terpenoid-quinone biosynthesis lyt00190   Oxidative phosphorylation lyt00220   Arginine biosynthesis lyt00230   Purine metabolism lyt00240   Pyrimidine metabolism lyt00250   Alanine, aspartate and glutamate metabolism lyt00260   Glycine, serine and threonine metabolism lyt00261   Monobactam biosynthesis lyt00270   Cysteine and methionine metabolism lyt00280   Valine, leucine and isoleucine degradation lyt00290   Valine, leucine and isoleucine biosynthesis lyt00300   Lysine biosynthesis lyt00310   Lysine degradation lyt00330   Arginine and proline metabolism lyt00340   Histidine metabolism lyt00350   Tyrosine metabolism lyt00360   Phenylalanine metabolism lyt00361   Chlorocyclohexane and chlorobenzene degradation lyt00362   Benzoate degradation lyt00364   Fluorobenzoate degradation lyt00380   Tryptophan metabolism lyt00400   Phenylalanine, tyrosine and tryptophan biosynthesis lyt00401   Novobiocin biosynthesis lyt00410   beta-Alanine metabolism lyt00430   Taurine and hypotaurine metabolism lyt00450   Selenocompound metabolism lyt00460   Cyanoamino acid metabolism lyt00470   D-Amino acid metabolism lyt00480   Glutathione metabolism lyt00500   Starch and sucrose metabolism lyt00520   Amino sugar and nucleotide sugar metabolism lyt00521   Streptomycin biosynthesis lyt00523   Polyketide sugar unit biosynthesis lyt00525   Acarbose and validamycin biosynthesis lyt00540   Lipopolysaccharide biosynthesis lyt00541   O-Antigen nucleotide sugar biosynthesis lyt00543   Exopolysaccharide biosynthesis lyt00550   Peptidoglycan biosynthesis lyt00552   Teichoic acid biosynthesis lyt00561   Glycerolipid metabolism lyt00562   Inositol phosphate metabolism lyt00564   Glycerophospholipid metabolism lyt00592   alpha-Linolenic acid metabolism lyt00620   Pyruvate metabolism lyt00623   Toluene degradation lyt00625   Chloroalkane and chloroalkene degradation lyt00626   Naphthalene degradation lyt00627   Aminobenzoate degradation lyt00630   Glyoxylate and dicarboxylate metabolism lyt00633   Nitrotoluene degradation lyt00640   Propanoate metabolism lyt00643   Styrene degradation lyt00650   Butanoate metabolism lyt00670   One carbon pool by folate lyt00680   Methane metabolism lyt00710   Carbon fixation by Calvin cycle lyt00720   Other carbon fixation pathways lyt00730   Thiamine metabolism lyt00740   Riboflavin metabolism lyt00750   Vitamin B6 metabolism lyt00760   Nicotinate and nicotinamide metabolism lyt00770   Pantothenate and CoA biosynthesis lyt00780   Biotin metabolism lyt00785   Lipoic acid metabolism lyt00790   Folate biosynthesis lyt00860   Porphyrin metabolism lyt00900   Terpenoid backbone biosynthesis lyt00907   Pinene, camphor and geraniol degradation lyt00910   Nitrogen metabolism lyt00920   Sulfur metabolism lyt00930   Caprolactam degradation lyt00999   Biosynthesis of various plant secondary metabolites lyt01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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