PATHWAY: masy01100 Help Entry masy01100                   Pathway                                 Name Metabolic pathways - Massilia sp. YMA4 Class BRITE hierarchy Pathway map masy01100   Metabolic pathways Module masy_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:masy01100] masy_M00002   Glycolysis, core module involving three-carbon compounds [PATH:masy01100] masy_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:masy01100] masy_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:masy01100] masy_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:masy01100] masy_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:masy01100] masy_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:masy01100] masy_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:masy01100] masy_M00012   Glyoxylate cycle [PATH:masy01100] masy_M00015   Proline biosynthesis, glutamate => proline [PATH:masy01100] masy_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:masy01100] masy_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:masy01100] masy_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:masy01100] masy_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:masy01100] masy_M00021   Cysteine biosynthesis, serine => cysteine [PATH:masy01100] masy_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:masy01100] masy_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:masy01100] masy_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:masy01100] masy_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:masy01100] masy_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:masy01100] masy_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:masy01100] masy_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:masy01100] masy_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:masy01100] masy_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:masy01100] masy_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:masy01100] masy_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:masy01100] masy_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:masy01100] masy_M00063   CMP-KDO biosynthesis [PATH:masy01100] masy_M00082   Fatty acid biosynthesis, initiation [PATH:masy01100] masy_M00083   Fatty acid biosynthesis, elongation [PATH:masy01100] masy_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:masy01100] masy_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:masy01100] masy_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:masy01100] masy_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:masy01100] masy_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:masy01100] masy_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:masy01100] masy_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:masy01100] masy_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:masy01100] masy_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:masy01100] masy_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:masy01100] masy_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:masy01100] masy_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:masy01100] masy_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:masy01100] masy_M00149   Succinate dehydrogenase, prokaryotes [PATH:masy01100] masy_M00151   Cytochrome bc1 complex respiratory unit [PATH:masy01100] masy_M00155   Cytochrome c oxidase, prokaryotes [PATH:masy01100] masy_M00156   Cytochrome c oxidase, cbb3-type [PATH:masy01100] masy_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:masy01100] masy_M00168   CAM (Crassulacean acid metabolism), dark [PATH:masy01100] masy_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:masy01100] masy_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:masy01100] masy_M00417   Cytochrome o ubiquinol oxidase [PATH:masy01100] masy_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:masy01100] masy_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:masy01100] masy_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:masy01100] masy_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:masy01100] masy_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:masy01100] masy_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:masy01100] masy_M00621   Glycine cleavage system [PATH:masy01100] masy_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:masy01100] masy_M00793   dTDP-L-rhamnose biosynthesis [PATH:masy01100] masy_M00844   Arginine biosynthesis, ornithine => arginine [PATH:masy01100] masy_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:masy01100] masy_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:masy01100] masy_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:masy01100] masy_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:masy01100] masy_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:masy01100] masy_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:masy01100] masy_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:masy01100] masy_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:masy01100] masy_M00970   Proline degradation, proline => glutamate [PATH:masy01100] Organism Massilia sp. YMA4 [GN:masy] Related pathway masy00010   Glycolysis / Gluconeogenesis masy00020   Citrate cycle (TCA cycle) masy00030   Pentose phosphate pathway masy00040   Pentose and glucuronate interconversions masy00051   Fructose and mannose metabolism masy00052   Galactose metabolism masy00053   Ascorbate and aldarate metabolism masy00061   Fatty acid biosynthesis masy00071   Fatty acid degradation masy00074   Mycolic acid biosynthesis masy00130   Ubiquinone and other terpenoid-quinone biosynthesis masy00190   Oxidative phosphorylation masy00220   Arginine biosynthesis masy00230   Purine metabolism masy00240   Pyrimidine metabolism masy00250   Alanine, aspartate and glutamate metabolism masy00260   Glycine, serine and threonine metabolism masy00261   Monobactam biosynthesis masy00270   Cysteine and methionine metabolism masy00280   Valine, leucine and isoleucine degradation masy00290   Valine, leucine and isoleucine biosynthesis masy00300   Lysine biosynthesis masy00310   Lysine degradation masy00311   Penicillin and cephalosporin biosynthesis masy00330   Arginine and proline metabolism masy00332   Carbapenem biosynthesis masy00340   Histidine metabolism masy00350   Tyrosine metabolism masy00360   Phenylalanine metabolism masy00361   Chlorocyclohexane and chlorobenzene degradation masy00362   Benzoate degradation masy00364   Fluorobenzoate degradation masy00380   Tryptophan metabolism masy00400   Phenylalanine, tyrosine and tryptophan biosynthesis masy00401   Novobiocin biosynthesis masy00410   beta-Alanine metabolism masy00430   Taurine and hypotaurine metabolism masy00450   Selenocompound metabolism masy00460   Cyanoamino acid metabolism masy00470   D-Amino acid metabolism masy00480   Glutathione metabolism masy00500   Starch and sucrose metabolism masy00520   Amino sugar and nucleotide sugar metabolism masy00521   Streptomycin biosynthesis masy00523   Polyketide sugar unit biosynthesis masy00525   Acarbose and validamycin biosynthesis masy00540   Lipopolysaccharide biosynthesis masy00541   O-Antigen nucleotide sugar biosynthesis masy00543   Exopolysaccharide biosynthesis masy00550   Peptidoglycan biosynthesis masy00552   Teichoic acid biosynthesis masy00561   Glycerolipid metabolism masy00562   Inositol phosphate metabolism masy00564   Glycerophospholipid metabolism masy00565   Ether lipid metabolism masy00590   Arachidonic acid metabolism masy00592   alpha-Linolenic acid metabolism masy00600   Sphingolipid metabolism masy00620   Pyruvate metabolism masy00623   Toluene degradation masy00624   Polycyclic aromatic hydrocarbon degradation masy00625   Chloroalkane and chloroalkene degradation masy00626   Naphthalene degradation masy00627   Aminobenzoate degradation masy00630   Glyoxylate and dicarboxylate metabolism masy00633   Nitrotoluene degradation masy00640   Propanoate metabolism masy00642   Ethylbenzene degradation masy00643   Styrene degradation masy00650   Butanoate metabolism masy00660   C5-Branched dibasic acid metabolism masy00670   One carbon pool by folate masy00680   Methane metabolism masy00710   Carbon fixation by Calvin cycle masy00720   Other carbon fixation pathways masy00730   Thiamine metabolism masy00740   Riboflavin metabolism masy00750   Vitamin B6 metabolism masy00760   Nicotinate and nicotinamide metabolism masy00770   Pantothenate and CoA biosynthesis masy00780   Biotin metabolism masy00785   Lipoic acid metabolism masy00790   Folate biosynthesis masy00860   Porphyrin metabolism masy00900   Terpenoid backbone biosynthesis masy00906   Carotenoid biosynthesis masy00907   Pinene, camphor and geraniol degradation masy00910   Nitrogen metabolism masy00920   Sulfur metabolism masy00946   Degradation of flavonoids masy00999   Biosynthesis of various plant secondary metabolites masy01040   Biosynthesis of unsaturated fatty acids masy01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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