KEGG   PATHWAY: mbe03050
Entry
mbe03050                    Pathway                                
Name
Proteasome - Drepanopeziza brunnea
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mbe03050  Proteasome
mbe03050

Other DBs
GO: 0000502
Organism
Drepanopeziza brunnea [GN:mbe]
Gene
MBM_05457  proteasome regulatory particle subunit [KO:K03033]
MBM_09823  26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
MBM_04093  26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
MBM_05179  hypothetical protein [KO:K03037]
MBM_02290  26S proteasome regulatory subunit rpn-8 [KO:K03038]
MBM_07433  PCI domain-containing protein [KO:K03039]
MBM_03927  26S proteasome regulatory subunit [KO:K03030]
MBM_06736  GANP/Nin1/mts3/eIF-3 p25 family protein [KO:K03031]
MBM_00074  26S proteasome regulatory subunit S5A, multiubiquitin chain binding protein [KO:K03029]
MBM_00783  proteasome/cyclosome [KO:K03028]
MBM_08382  proteasome/cyclosome [KO:K03032]
MBM_05799  hypothetical protein [KO:K06691]
MBM_01472  26S protease regulatory subunit 7 [KO:K03061]
MBM_08762  putative 26S protease regulatory subunit 4 [KO:K03062]
MBM_05538  26S protease regulatory subunit 8 [KO:K03066]
MBM_06237  26S protease regulatory subunit s10b [KO:K03064]
MBM_09497  26S protease regulatory subunit 6A [KO:K03065]
MBM_06828  26S protease regulatory subunit 6B [KO:K03063]
MBM_01854  GPI mannosyltransferase [KO:K06699]
MBM_07894  proteasome subunit alpha type 6 [KO:K02730] [EC:3.4.25.1]
MBM_04619  20S proteasome subunit Y7 [KO:K02726] [EC:3.4.25.1]
MBM_08157  proteasome component Y13 [KO:K02728] [EC:3.4.25.1]
MBM_06947  alpha-type of subunit of 20S proteasome [KO:K02731] [EC:3.4.25.1]
MBM_01677  20S proteasome alpha subunit E [KO:K02729] [EC:3.4.25.1]
MBM_05676  proteasome subunit alpha type 1 [KO:K02725] [EC:3.4.25.1]
MBM_04854  proteasome component C1 [KO:K02727] [EC:3.4.25.1]
MBM_04868  proteasome A-type and B-type [KO:K02738] [EC:3.4.25.1]
MBM_04903  proteasome A-type and B-type [KO:K02739] [EC:3.4.25.1]
MBM_00477  proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
MBM_05427  proteasome component Pre1 [KO:K02734] [EC:3.4.25.1]
MBM_01369  proteasome A-type and B-type [KO:K02737] [EC:3.4.25.1]
MBM_06224  proteasome component C5 [KO:K02732] [EC:3.4.25.1]
MBM_06216  proteasome component PRE4 [KO:K02736] [EC:3.4.25.1]
MBM_00153  20S proteasome maturation protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
mbe04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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