KEGG   PATHWAY: mgry01100
Entry
mgry01100                   Pathway                                
Name
Metabolic pathways - Magnetospirillum gryphiswaldense MSR-1
Class
Pathway map
mgry01100  Metabolic pathways
mgry01100

Module
mgry_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mgry01100]
mgry_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mgry01100]
mgry_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mgry01100]
mgry_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mgry01100]
mgry_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mgry01100]
mgry_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:mgry01100]
mgry_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mgry01100]
mgry_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mgry01100]
mgry_M00015  Proline biosynthesis, glutamate => proline [PATH:mgry01100]
mgry_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:mgry01100]
mgry_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:mgry01100]
mgry_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mgry01100]
mgry_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mgry01100]
mgry_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:mgry01100]
mgry_M00021  Cysteine biosynthesis, serine => cysteine [PATH:mgry01100]
mgry_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:mgry01100]
mgry_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:mgry01100]
mgry_M00026  Histidine biosynthesis, PRPP => histidine [PATH:mgry01100]
mgry_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:mgry01100]
mgry_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mgry01100]
mgry_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mgry01100]
mgry_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mgry01100]
mgry_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mgry01100]
mgry_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:mgry01100]
mgry_M00082  Fatty acid biosynthesis, initiation [PATH:mgry01100]
mgry_M00083  Fatty acid biosynthesis, elongation [PATH:mgry01100]
mgry_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:mgry01100]
mgry_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:mgry01100]
mgry_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mgry01100]
mgry_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:mgry01100]
mgry_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:mgry01100]
mgry_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mgry01100]
mgry_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mgry01100]
mgry_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mgry01100]
mgry_M00149  Succinate dehydrogenase, prokaryotes [PATH:mgry01100]
mgry_M00151  Cytochrome bc1 complex respiratory unit [PATH:mgry01100]
mgry_M00155  Cytochrome c oxidase, prokaryotes [PATH:mgry01100]
mgry_M00156  Cytochrome c oxidase, cbb3-type [PATH:mgry01100]
mgry_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:mgry01100]
mgry_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:mgry01100]
mgry_M00168  CAM (Crassulacean acid metabolism), dark [PATH:mgry01100]
mgry_M00169  CAM (Crassulacean acid metabolism), light [PATH:mgry01100]
mgry_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:mgry01100]
mgry_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:mgry01100]
mgry_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mgry01100]
mgry_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mgry01100]
mgry_M00529  Denitrification, nitrate => nitrogen [PATH:mgry01100]
mgry_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:mgry01100]
mgry_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mgry01100]
mgry_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mgry01100]
mgry_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:mgry01100]
mgry_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:mgry01100]
mgry_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:mgry01100]
mgry_M00621  Glycine cleavage system [PATH:mgry01100]
mgry_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mgry01100]
mgry_M00844  Arginine biosynthesis, ornithine => arginine [PATH:mgry01100]
mgry_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mgry01100]
mgry_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mgry01100]
mgry_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mgry01100]
mgry_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mgry01100]
Organism
Magnetospirillum gryphiswaldense MSR-1 [GN:mgry]
Related
pathway
mgry00010  Glycolysis / Gluconeogenesis
mgry00020  Citrate cycle (TCA cycle)
mgry00030  Pentose phosphate pathway
mgry00040  Pentose and glucuronate interconversions
mgry00051  Fructose and mannose metabolism
mgry00052  Galactose metabolism
mgry00053  Ascorbate and aldarate metabolism
mgry00061  Fatty acid biosynthesis
mgry00071  Fatty acid degradation
mgry00130  Ubiquinone and other terpenoid-quinone biosynthesis
mgry00190  Oxidative phosphorylation
mgry00220  Arginine biosynthesis
mgry00230  Purine metabolism
mgry00240  Pyrimidine metabolism
mgry00250  Alanine, aspartate and glutamate metabolism
mgry00260  Glycine, serine and threonine metabolism
mgry00261  Monobactam biosynthesis
mgry00270  Cysteine and methionine metabolism
mgry00280  Valine, leucine and isoleucine degradation
mgry00290  Valine, leucine and isoleucine biosynthesis
mgry00300  Lysine biosynthesis
mgry00310  Lysine degradation
mgry00330  Arginine and proline metabolism
mgry00332  Carbapenem biosynthesis
mgry00340  Histidine metabolism
mgry00350  Tyrosine metabolism
mgry00360  Phenylalanine metabolism
mgry00361  Chlorocyclohexane and chlorobenzene degradation
mgry00362  Benzoate degradation
mgry00364  Fluorobenzoate degradation
mgry00380  Tryptophan metabolism
mgry00400  Phenylalanine, tyrosine and tryptophan biosynthesis
mgry00401  Novobiocin biosynthesis
mgry00410  beta-Alanine metabolism
mgry00430  Taurine and hypotaurine metabolism
mgry00440  Phosphonate and phosphinate metabolism
mgry00450  Selenocompound metabolism
mgry00460  Cyanoamino acid metabolism
mgry00470  D-Amino acid metabolism
mgry00480  Glutathione metabolism
mgry00500  Starch and sucrose metabolism
mgry00520  Amino sugar and nucleotide sugar metabolism
mgry00521  Streptomycin biosynthesis
mgry00523  Polyketide sugar unit biosynthesis
mgry00525  Acarbose and validamycin biosynthesis
mgry00540  Lipopolysaccharide biosynthesis
mgry00541  O-Antigen nucleotide sugar biosynthesis
mgry00543  Exopolysaccharide biosynthesis
mgry00550  Peptidoglycan biosynthesis
mgry00552  Teichoic acid biosynthesis
mgry00561  Glycerolipid metabolism
mgry00562  Inositol phosphate metabolism
mgry00564  Glycerophospholipid metabolism
mgry00620  Pyruvate metabolism
mgry00623  Toluene degradation
mgry00627  Aminobenzoate degradation
mgry00630  Glyoxylate and dicarboxylate metabolism
mgry00633  Nitrotoluene degradation
mgry00640  Propanoate metabolism
mgry00643  Styrene degradation
mgry00650  Butanoate metabolism
mgry00660  C5-Branched dibasic acid metabolism
mgry00670  One carbon pool by folate
mgry00680  Methane metabolism
mgry00710  Carbon fixation by Calvin cycle
mgry00720  Other carbon fixation pathways
mgry00730  Thiamine metabolism
mgry00740  Riboflavin metabolism
mgry00750  Vitamin B6 metabolism
mgry00760  Nicotinate and nicotinamide metabolism
mgry00770  Pantothenate and CoA biosynthesis
mgry00780  Biotin metabolism
mgry00785  Lipoic acid metabolism
mgry00790  Folate biosynthesis
mgry00791  Atrazine degradation
mgry00860  Porphyrin metabolism
mgry00900  Terpenoid backbone biosynthesis
mgry00906  Carotenoid biosynthesis
mgry00907  Pinene, camphor and geraniol degradation
mgry00910  Nitrogen metabolism
mgry00920  Sulfur metabolism
mgry00946  Degradation of flavonoids
mgry00999  Biosynthesis of various plant secondary metabolites
mgry01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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