PATHWAY: mjl01100 Help Entry mjl01100                    Pathway                                 Name Metabolic pathways - Mycobacterium sp. JLS Class BRITE hierarchy Pathway map mjl01100   Metabolic pathways Module mjl_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mjl01100] mjl_M00002   Glycolysis, core module involving three-carbon compounds [PATH:mjl01100] mjl_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mjl01100] mjl_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mjl01100] mjl_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:mjl01100] mjl_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mjl01100] mjl_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mjl01100] mjl_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:mjl01100] mjl_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mjl01100] mjl_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mjl01100] mjl_M00015   Proline biosynthesis, glutamate => proline [PATH:mjl01100] mjl_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:mjl01100] mjl_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mjl01100] mjl_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mjl01100] mjl_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:mjl01100] mjl_M00021   Cysteine biosynthesis, serine => cysteine [PATH:mjl01100] mjl_M00026   Histidine biosynthesis, PRPP => histidine [PATH:mjl01100] mjl_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:mjl01100] mjl_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:mjl01100] mjl_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:mjl01100] mjl_M00035   Methionine degradation [PATH:mjl01100] mjl_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mjl01100] mjl_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mjl01100] mjl_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mjl01100] mjl_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mjl01100] mjl_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mjl01100] mjl_M00082   Fatty acid biosynthesis, initiation [PATH:mjl01100] mjl_M00083   Fatty acid biosynthesis, elongation [PATH:mjl01100] mjl_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:mjl01100] mjl_M00087   beta-Oxidation [PATH:mjl01100] mjl_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:mjl01100] mjl_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:mjl01100] mjl_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mjl01100] mjl_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:mjl01100] mjl_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:mjl01100] mjl_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mjl01100] mjl_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mjl01100] mjl_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:mjl01100] mjl_M00149   Succinate dehydrogenase, prokaryotes [PATH:mjl01100] mjl_M00151   Cytochrome bc1 complex respiratory unit [PATH:mjl01100] mjl_M00155   Cytochrome c oxidase, prokaryotes [PATH:mjl01100] mjl_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:mjl01100] mjl_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:mjl01100] mjl_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mjl01100] mjl_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:mjl01100] mjl_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:mjl01100] mjl_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mjl01100] mjl_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:mjl01100] mjl_M00545   Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:mjl01100] mjl_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mjl01100] mjl_M00555   Betaine biosynthesis, choline => betaine [PATH:mjl01100] mjl_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mjl01100] mjl_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:mjl01100] mjl_M00621   Glycine cleavage system [PATH:mjl01100] mjl_M00636   Phthalate degradation, phthalate => protocatechuate [PATH:mjl01100] mjl_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mjl01100] mjl_M00793   dTDP-L-rhamnose biosynthesis [PATH:mjl01100] mjl_M00844   Arginine biosynthesis, ornithine => arginine [PATH:mjl01100] mjl_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mjl01100] mjl_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mjl01100] mjl_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mjl01100] mjl_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mjl01100] mjl_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mjl01100] mjl_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:mjl01100] mjl_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mjl01100] mjl_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:mjl01100] mjl_M00970   Proline degradation, proline => glutamate [PATH:mjl01100] mjl_M00972   Proline metabolism [PATH:mjl01100] Organism Mycobacterium sp. JLS [GN:mjl] Related pathway mjl00010   Glycolysis / Gluconeogenesis mjl00020   Citrate cycle (TCA cycle) mjl00030   Pentose phosphate pathway mjl00040   Pentose and glucuronate interconversions mjl00051   Fructose and mannose metabolism mjl00052   Galactose metabolism mjl00053   Ascorbate and aldarate metabolism mjl00061   Fatty acid biosynthesis mjl00071   Fatty acid degradation mjl00100   Steroid biosynthesis mjl00121   Secondary bile acid biosynthesis mjl00130   Ubiquinone and other terpenoid-quinone biosynthesis mjl00190   Oxidative phosphorylation mjl00220   Arginine biosynthesis mjl00230   Purine metabolism mjl00240   Pyrimidine metabolism mjl00250   Alanine, aspartate and glutamate metabolism mjl00260   Glycine, serine and threonine metabolism mjl00261   Monobactam biosynthesis mjl00270   Cysteine and methionine metabolism mjl00280   Valine, leucine and isoleucine degradation mjl00290   Valine, leucine and isoleucine biosynthesis mjl00300   Lysine biosynthesis mjl00310   Lysine degradation mjl00330   Arginine and proline metabolism mjl00332   Carbapenem biosynthesis mjl00340   Histidine metabolism mjl00350   Tyrosine metabolism mjl00360   Phenylalanine metabolism mjl00361   Chlorocyclohexane and chlorobenzene degradation mjl00362   Benzoate degradation mjl00364   Fluorobenzoate degradation mjl00380   Tryptophan metabolism mjl00400   Phenylalanine, tyrosine and tryptophan biosynthesis mjl00401   Novobiocin biosynthesis mjl00410   beta-Alanine metabolism mjl00430   Taurine and hypotaurine metabolism mjl00450   Selenocompound metabolism mjl00460   Cyanoamino acid metabolism mjl00470   D-Amino acid metabolism mjl00480   Glutathione metabolism mjl00500   Starch and sucrose metabolism mjl00511   Other glycan degradation mjl00514   Other types of O-glycan biosynthesis mjl00515   Mannose type O-glycan biosynthesis mjl00520   Amino sugar and nucleotide sugar metabolism mjl00521   Streptomycin biosynthesis mjl00523   Polyketide sugar unit biosynthesis mjl00525   Acarbose and validamycin biosynthesis mjl00541   O-Antigen nucleotide sugar biosynthesis mjl00542   O-Antigen repeat unit biosynthesis mjl00543   Exopolysaccharide biosynthesis mjl00550   Peptidoglycan biosynthesis mjl00552   Teichoic acid biosynthesis mjl00561   Glycerolipid metabolism mjl00562   Inositol phosphate metabolism mjl00564   Glycerophospholipid metabolism mjl00571   Lipoarabinomannan (LAM) biosynthesis mjl00572   Arabinogalactan biosynthesis - Mycobacterium mjl00592   alpha-Linolenic acid metabolism mjl00620   Pyruvate metabolism mjl00621   Dioxin degradation mjl00622   Xylene degradation mjl00623   Toluene degradation mjl00624   Polycyclic aromatic hydrocarbon degradation mjl00625   Chloroalkane and chloroalkene degradation mjl00626   Naphthalene degradation mjl00627   Aminobenzoate degradation mjl00630   Glyoxylate and dicarboxylate metabolism mjl00633   Nitrotoluene degradation mjl00640   Propanoate metabolism mjl00642   Ethylbenzene degradation mjl00643   Styrene degradation mjl00650   Butanoate metabolism mjl00660   C5-Branched dibasic acid metabolism mjl00670   One carbon pool by folate mjl00680   Methane metabolism mjl00710   Carbon fixation by Calvin cycle mjl00720   Other carbon fixation pathways mjl00730   Thiamine metabolism mjl00740   Riboflavin metabolism mjl00750   Vitamin B6 metabolism mjl00760   Nicotinate and nicotinamide metabolism mjl00770   Pantothenate and CoA biosynthesis mjl00780   Biotin metabolism mjl00785   Lipoic acid metabolism mjl00790   Folate biosynthesis mjl00791   Atrazine degradation mjl00860   Porphyrin metabolism mjl00900   Terpenoid backbone biosynthesis mjl00903   Limonene degradation mjl00906   Carotenoid biosynthesis mjl00907   Pinene, camphor and geraniol degradation mjl00910   Nitrogen metabolism mjl00920   Sulfur metabolism mjl00930   Caprolactam degradation mjl00983   Drug metabolism - other enzymes mjl00984   Steroid degradation mjl01040   Biosynthesis of unsaturated fatty acids mjl01053   Biosynthesis of siderophore group nonribosomal peptides mjl01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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