PATHWAY: mlir01100 Help Entry mlir01100                   Pathway                                 Name Metabolic pathways - Massilia litorea Class BRITE hierarchy Pathway map mlir01100   Metabolic pathways Module mlir_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mlir01100] mlir_M00002   Glycolysis, core module involving three-carbon compounds [PATH:mlir01100] mlir_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mlir01100] mlir_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:mlir01100] mlir_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mlir01100] mlir_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:mlir01100] mlir_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mlir01100] mlir_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mlir01100] mlir_M00012   Glyoxylate cycle [PATH:mlir01100] mlir_M00015   Proline biosynthesis, glutamate => proline [PATH:mlir01100] mlir_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:mlir01100] mlir_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mlir01100] mlir_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mlir01100] mlir_M00021   Cysteine biosynthesis, serine => cysteine [PATH:mlir01100] mlir_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:mlir01100] mlir_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:mlir01100] mlir_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:mlir01100] mlir_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:mlir01100] mlir_M00035   Methionine degradation [PATH:mlir01100] mlir_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:mlir01100] mlir_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:mlir01100] mlir_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:mlir01100] mlir_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:mlir01100] mlir_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mlir01100] mlir_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mlir01100] mlir_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mlir01100] mlir_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mlir01100] mlir_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mlir01100] mlir_M00063   CMP-KDO biosynthesis [PATH:mlir01100] mlir_M00082   Fatty acid biosynthesis, initiation [PATH:mlir01100] mlir_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:mlir01100] mlir_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:mlir01100] mlir_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mlir01100] mlir_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:mlir01100] mlir_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:mlir01100] mlir_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mlir01100] mlir_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mlir01100] mlir_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:mlir01100] mlir_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:mlir01100] mlir_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:mlir01100] mlir_M00149   Succinate dehydrogenase, prokaryotes [PATH:mlir01100] mlir_M00151   Cytochrome bc1 complex respiratory unit [PATH:mlir01100] mlir_M00155   Cytochrome c oxidase, prokaryotes [PATH:mlir01100] mlir_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:mlir01100] mlir_M00168   CAM (Crassulacean acid metabolism), dark [PATH:mlir01100] mlir_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mlir01100] mlir_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:mlir01100] mlir_M00417   Cytochrome o ubiquinol oxidase [PATH:mlir01100] mlir_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mlir01100] mlir_M00548   Benzene degradation, benzene => catechol [PATH:mlir01100] mlir_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mlir01100] mlir_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:mlir01100] mlir_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:mlir01100] mlir_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:mlir01100] mlir_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mlir01100] mlir_M00621   Glycine cleavage system [PATH:mlir01100] mlir_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:mlir01100] mlir_M00793   dTDP-L-rhamnose biosynthesis [PATH:mlir01100] mlir_M00844   Arginine biosynthesis, ornithine => arginine [PATH:mlir01100] mlir_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:mlir01100] mlir_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mlir01100] mlir_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mlir01100] mlir_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mlir01100] mlir_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mlir01100] mlir_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:mlir01100] mlir_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:mlir01100] mlir_M00970   Proline degradation, proline => glutamate [PATH:mlir01100] Organism Massilia litorea [GN:mlir] Related pathway mlir00010   Glycolysis / Gluconeogenesis mlir00020   Citrate cycle (TCA cycle) mlir00030   Pentose phosphate pathway mlir00040   Pentose and glucuronate interconversions mlir00051   Fructose and mannose metabolism mlir00052   Galactose metabolism mlir00053   Ascorbate and aldarate metabolism mlir00061   Fatty acid biosynthesis mlir00071   Fatty acid degradation mlir00074   Mycolic acid biosynthesis mlir00130   Ubiquinone and other terpenoid-quinone biosynthesis mlir00190   Oxidative phosphorylation mlir00220   Arginine biosynthesis mlir00230   Purine metabolism mlir00240   Pyrimidine metabolism mlir00250   Alanine, aspartate and glutamate metabolism mlir00260   Glycine, serine and threonine metabolism mlir00261   Monobactam biosynthesis mlir00270   Cysteine and methionine metabolism mlir00280   Valine, leucine and isoleucine degradation mlir00290   Valine, leucine and isoleucine biosynthesis mlir00300   Lysine biosynthesis mlir00310   Lysine degradation mlir00330   Arginine and proline metabolism mlir00332   Carbapenem biosynthesis mlir00340   Histidine metabolism mlir00350   Tyrosine metabolism mlir00360   Phenylalanine metabolism mlir00361   Chlorocyclohexane and chlorobenzene degradation mlir00362   Benzoate degradation mlir00364   Fluorobenzoate degradation mlir00380   Tryptophan metabolism mlir00400   Phenylalanine, tyrosine and tryptophan biosynthesis mlir00401   Novobiocin biosynthesis mlir00410   beta-Alanine metabolism mlir00430   Taurine and hypotaurine metabolism mlir00450   Selenocompound metabolism mlir00460   Cyanoamino acid metabolism mlir00470   D-Amino acid metabolism mlir00480   Glutathione metabolism mlir00500   Starch and sucrose metabolism mlir00520   Amino sugar and nucleotide sugar metabolism mlir00521   Streptomycin biosynthesis mlir00523   Polyketide sugar unit biosynthesis mlir00525   Acarbose and validamycin biosynthesis mlir00540   Lipopolysaccharide biosynthesis mlir00541   O-Antigen nucleotide sugar biosynthesis mlir00543   Exopolysaccharide biosynthesis mlir00550   Peptidoglycan biosynthesis mlir00552   Teichoic acid biosynthesis mlir00561   Glycerolipid metabolism mlir00562   Inositol phosphate metabolism mlir00564   Glycerophospholipid metabolism mlir00565   Ether lipid metabolism mlir00592   alpha-Linolenic acid metabolism mlir00620   Pyruvate metabolism mlir00622   Xylene degradation mlir00623   Toluene degradation mlir00624   Polycyclic aromatic hydrocarbon degradation mlir00625   Chloroalkane and chloroalkene degradation mlir00626   Naphthalene degradation mlir00627   Aminobenzoate degradation mlir00630   Glyoxylate and dicarboxylate metabolism mlir00633   Nitrotoluene degradation mlir00640   Propanoate metabolism mlir00643   Styrene degradation mlir00650   Butanoate metabolism mlir00660   C5-Branched dibasic acid metabolism mlir00670   One carbon pool by folate mlir00680   Methane metabolism mlir00710   Carbon fixation by Calvin cycle mlir00720   Other carbon fixation pathways mlir00730   Thiamine metabolism mlir00740   Riboflavin metabolism mlir00750   Vitamin B6 metabolism mlir00760   Nicotinate and nicotinamide metabolism mlir00770   Pantothenate and CoA biosynthesis mlir00780   Biotin metabolism mlir00785   Lipoic acid metabolism mlir00790   Folate biosynthesis mlir00860   Porphyrin metabolism mlir00900   Terpenoid backbone biosynthesis mlir00906   Carotenoid biosynthesis mlir00907   Pinene, camphor and geraniol degradation mlir00909   Sesquiterpenoid and triterpenoid biosynthesis mlir00910   Nitrogen metabolism mlir00920   Sulfur metabolism mlir00996   Biosynthesis of various alkaloids mlir00999   Biosynthesis of various plant secondary metabolites mlir01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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