KEGG   PATHWAY: msed01100
Entry
msed01100                   Pathway                                
Name
Metabolic pathways - Microbacterium sediminis
Class
Pathway map
msed01100  Metabolic pathways
msed01100

Module
msed_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msed01100]
msed_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msed01100]
msed_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msed01100]
msed_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:msed01100]
msed_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:msed01100]
msed_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:msed01100]
msed_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:msed01100]
msed_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:msed01100]
msed_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msed01100]
msed_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:msed01100]
msed_M00012  Glyoxylate cycle [PATH:msed01100]
msed_M00015  Proline biosynthesis, glutamate => proline [PATH:msed01100]
msed_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:msed01100]
msed_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:msed01100]
msed_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:msed01100]
msed_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:msed01100]
msed_M00021  Cysteine biosynthesis, serine => cysteine [PATH:msed01100]
msed_M00026  Histidine biosynthesis, PRPP => histidine [PATH:msed01100]
msed_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:msed01100]
msed_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:msed01100]
msed_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:msed01100]
msed_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msed01100]
msed_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msed01100]
msed_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:msed01100]
msed_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:msed01100]
msed_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:msed01100]
msed_M00149  Succinate dehydrogenase, prokaryotes [PATH:msed01100]
msed_M00151  Cytochrome bc1 complex respiratory unit [PATH:msed01100]
msed_M00155  Cytochrome c oxidase, prokaryotes [PATH:msed01100]
msed_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:msed01100]
msed_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msed01100]
msed_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:msed01100]
msed_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:msed01100]
msed_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:msed01100]
msed_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:msed01100]
msed_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:msed01100]
msed_M00621  Glycine cleavage system [PATH:msed01100]
msed_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:msed01100]
msed_M00793  dTDP-L-rhamnose biosynthesis [PATH:msed01100]
msed_M00844  Arginine biosynthesis, ornithine => arginine [PATH:msed01100]
msed_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:msed01100]
msed_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:msed01100]
msed_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:msed01100]
msed_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:msed01100]
msed_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msed01100]
msed_M00970  Proline degradation, proline => glutamate [PATH:msed01100]
Organism
Microbacterium sediminis [GN:msed]
Related
pathway
msed00010  Glycolysis / Gluconeogenesis
msed00020  Citrate cycle (TCA cycle)
msed00030  Pentose phosphate pathway
msed00040  Pentose and glucuronate interconversions
msed00051  Fructose and mannose metabolism
msed00052  Galactose metabolism
msed00061  Fatty acid biosynthesis
msed00062  Fatty acid elongation
msed00071  Fatty acid degradation
msed00130  Ubiquinone and other terpenoid-quinone biosynthesis
msed00190  Oxidative phosphorylation
msed00220  Arginine biosynthesis
msed00230  Purine metabolism
msed00240  Pyrimidine metabolism
msed00250  Alanine, aspartate and glutamate metabolism
msed00260  Glycine, serine and threonine metabolism
msed00261  Monobactam biosynthesis
msed00270  Cysteine and methionine metabolism
msed00280  Valine, leucine and isoleucine degradation
msed00290  Valine, leucine and isoleucine biosynthesis
msed00300  Lysine biosynthesis
msed00310  Lysine degradation
msed00311  Penicillin and cephalosporin biosynthesis
msed00330  Arginine and proline metabolism
msed00332  Carbapenem biosynthesis
msed00340  Histidine metabolism
msed00350  Tyrosine metabolism
msed00360  Phenylalanine metabolism
msed00362  Benzoate degradation
msed00380  Tryptophan metabolism
msed00400  Phenylalanine, tyrosine and tryptophan biosynthesis
msed00401  Novobiocin biosynthesis
msed00410  beta-Alanine metabolism
msed00430  Taurine and hypotaurine metabolism
msed00440  Phosphonate and phosphinate metabolism
msed00450  Selenocompound metabolism
msed00460  Cyanoamino acid metabolism
msed00470  D-Amino acid metabolism
msed00480  Glutathione metabolism
msed00500  Starch and sucrose metabolism
msed00511  Other glycan degradation
msed00514  Other types of O-glycan biosynthesis
msed00515  Mannose type O-glycan biosynthesis
msed00520  Amino sugar and nucleotide sugar metabolism
msed00521  Streptomycin biosynthesis
msed00523  Polyketide sugar unit biosynthesis
msed00525  Acarbose and validamycin biosynthesis
msed00541  O-Antigen nucleotide sugar biosynthesis
msed00542  O-Antigen repeat unit biosynthesis
msed00543  Exopolysaccharide biosynthesis
msed00550  Peptidoglycan biosynthesis
msed00552  Teichoic acid biosynthesis
msed00561  Glycerolipid metabolism
msed00562  Inositol phosphate metabolism
msed00564  Glycerophospholipid metabolism
msed00592  alpha-Linolenic acid metabolism
msed00600  Sphingolipid metabolism
msed00620  Pyruvate metabolism
msed00622  Xylene degradation
msed00623  Toluene degradation
msed00624  Polycyclic aromatic hydrocarbon degradation
msed00625  Chloroalkane and chloroalkene degradation
msed00626  Naphthalene degradation
msed00627  Aminobenzoate degradation
msed00630  Glyoxylate and dicarboxylate metabolism
msed00640  Propanoate metabolism
msed00643  Styrene degradation
msed00650  Butanoate metabolism
msed00660  C5-Branched dibasic acid metabolism
msed00670  One carbon pool by folate
msed00680  Methane metabolism
msed00710  Carbon fixation by Calvin cycle
msed00720  Other carbon fixation pathways
msed00730  Thiamine metabolism
msed00740  Riboflavin metabolism
msed00750  Vitamin B6 metabolism
msed00760  Nicotinate and nicotinamide metabolism
msed00770  Pantothenate and CoA biosynthesis
msed00780  Biotin metabolism
msed00785  Lipoic acid metabolism
msed00790  Folate biosynthesis
msed00860  Porphyrin metabolism
msed00900  Terpenoid backbone biosynthesis
msed00907  Pinene, camphor and geraniol degradation
msed00910  Nitrogen metabolism
msed00920  Sulfur metabolism
msed00946  Degradation of flavonoids
msed00999  Biosynthesis of various plant secondary metabolites
msed01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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