PATHWAY: msep01100 Help Entry msep01100                   Pathway                                 Name Metabolic pathways - Mergibacter septicus Class BRITE hierarchy Pathway map msep01100   Metabolic pathways Module msep_M00002   Glycolysis, core module involving three-carbon compounds [PATH:msep01100] msep_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:msep01100] msep_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:msep01100] msep_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:msep01100] msep_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:msep01100] msep_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:msep01100] msep_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:msep01100] msep_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msep01100] msep_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:msep01100] msep_M00015   Proline biosynthesis, glutamate => proline [PATH:msep01100] msep_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:msep01100] msep_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:msep01100] msep_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:msep01100] msep_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:msep01100] msep_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:msep01100] msep_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:msep01100] msep_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:msep01100] msep_M00026   Histidine biosynthesis, PRPP => histidine [PATH:msep01100] msep_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:msep01100] msep_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:msep01100] msep_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:msep01100] msep_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:msep01100] msep_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:msep01100] msep_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:msep01100] msep_M00063   CMP-KDO biosynthesis [PATH:msep01100] msep_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:msep01100] msep_M00082   Fatty acid biosynthesis, initiation [PATH:msep01100] msep_M00083   Fatty acid biosynthesis, elongation [PATH:msep01100] msep_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:msep01100] msep_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:msep01100] msep_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:msep01100] msep_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:msep01100] msep_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:msep01100] msep_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:msep01100] msep_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:msep01100] msep_M00150   Fumarate reductase, prokaryotes [PATH:msep01100] msep_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:msep01100] msep_M00168   CAM (Crassulacean acid metabolism), dark [PATH:msep01100] msep_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msep01100] msep_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:msep01100] msep_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:msep01100] msep_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:msep01100] msep_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:msep01100] msep_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:msep01100] msep_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:msep01100] msep_M00844   Arginine biosynthesis, ornithine => arginine [PATH:msep01100] msep_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:msep01100] msep_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:msep01100] msep_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:msep01100] msep_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:msep01100] msep_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:msep01100] msep_M00970   Proline degradation, proline => glutamate [PATH:msep01100] Organism Mergibacter septicus [GN:msep] Related pathway msep00010   Glycolysis / Gluconeogenesis msep00020   Citrate cycle (TCA cycle) msep00030   Pentose phosphate pathway msep00040   Pentose and glucuronate interconversions msep00051   Fructose and mannose metabolism msep00052   Galactose metabolism msep00053   Ascorbate and aldarate metabolism msep00061   Fatty acid biosynthesis msep00071   Fatty acid degradation msep00121   Secondary bile acid biosynthesis msep00130   Ubiquinone and other terpenoid-quinone biosynthesis msep00190   Oxidative phosphorylation msep00220   Arginine biosynthesis msep00230   Purine metabolism msep00240   Pyrimidine metabolism msep00250   Alanine, aspartate and glutamate metabolism msep00260   Glycine, serine and threonine metabolism msep00261   Monobactam biosynthesis msep00270   Cysteine and methionine metabolism msep00280   Valine, leucine and isoleucine degradation msep00290   Valine, leucine and isoleucine biosynthesis msep00300   Lysine biosynthesis msep00310   Lysine degradation msep00330   Arginine and proline metabolism msep00332   Carbapenem biosynthesis msep00340   Histidine metabolism msep00350   Tyrosine metabolism msep00360   Phenylalanine metabolism msep00362   Benzoate degradation msep00380   Tryptophan metabolism msep00400   Phenylalanine, tyrosine and tryptophan biosynthesis msep00401   Novobiocin biosynthesis msep00410   beta-Alanine metabolism msep00430   Taurine and hypotaurine metabolism msep00450   Selenocompound metabolism msep00460   Cyanoamino acid metabolism msep00470   D-Amino acid metabolism msep00480   Glutathione metabolism msep00500   Starch and sucrose metabolism msep00520   Amino sugar and nucleotide sugar metabolism msep00521   Streptomycin biosynthesis msep00540   Lipopolysaccharide biosynthesis msep00541   O-Antigen nucleotide sugar biosynthesis msep00543   Exopolysaccharide biosynthesis msep00550   Peptidoglycan biosynthesis msep00561   Glycerolipid metabolism msep00562   Inositol phosphate metabolism msep00564   Glycerophospholipid metabolism msep00592   alpha-Linolenic acid metabolism msep00620   Pyruvate metabolism msep00625   Chloroalkane and chloroalkene degradation msep00626   Naphthalene degradation msep00630   Glyoxylate and dicarboxylate metabolism msep00640   Propanoate metabolism msep00650   Butanoate metabolism msep00660   C5-Branched dibasic acid metabolism msep00670   One carbon pool by folate msep00680   Methane metabolism msep00710   Carbon fixation by Calvin cycle msep00720   Other carbon fixation pathways msep00730   Thiamine metabolism msep00740   Riboflavin metabolism msep00750   Vitamin B6 metabolism msep00760   Nicotinate and nicotinamide metabolism msep00770   Pantothenate and CoA biosynthesis msep00780   Biotin metabolism msep00785   Lipoic acid metabolism msep00790   Folate biosynthesis msep00860   Porphyrin metabolism msep00900   Terpenoid backbone biosynthesis msep00907   Pinene, camphor and geraniol degradation msep00910   Nitrogen metabolism msep00920   Sulfur metabolism msep00930   Caprolactam degradation msep00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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