KEGG   PATHWAY: mshj01100
Entry
mshj01100                   Pathway                                
Name
Metabolic pathways - Mycobacterium shinjukuense
Class
Pathway map
mshj01100  Metabolic pathways
mshj01100

Module
mshj_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mshj01100]
mshj_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mshj01100]
mshj_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mshj01100]
mshj_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mshj01100]
mshj_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mshj01100]
mshj_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mshj01100]
mshj_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mshj01100]
mshj_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:mshj01100]
mshj_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mshj01100]
mshj_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mshj01100]
mshj_M00012  Glyoxylate cycle [PATH:mshj01100]
mshj_M00015  Proline biosynthesis, glutamate => proline [PATH:mshj01100]
mshj_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:mshj01100]
mshj_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mshj01100]
mshj_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mshj01100]
mshj_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:mshj01100]
mshj_M00021  Cysteine biosynthesis, serine => cysteine [PATH:mshj01100]
mshj_M00026  Histidine biosynthesis, PRPP => histidine [PATH:mshj01100]
mshj_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:mshj01100]
mshj_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:mshj01100]
mshj_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mshj01100]
mshj_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mshj01100]
mshj_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mshj01100]
mshj_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mshj01100]
mshj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mshj01100]
mshj_M00082  Fatty acid biosynthesis, initiation [PATH:mshj01100]
mshj_M00083  Fatty acid biosynthesis, elongation [PATH:mshj01100]
mshj_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:mshj01100]
mshj_M00087  beta-Oxidation [PATH:mshj01100]
mshj_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:mshj01100]
mshj_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:mshj01100]
mshj_M00098  Acylglycerol degradation [PATH:mshj01100]
mshj_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mshj01100]
mshj_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:mshj01100]
mshj_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mshj01100]
mshj_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:mshj01100]
mshj_M00149  Succinate dehydrogenase, prokaryotes [PATH:mshj01100]
mshj_M00150  Fumarate reductase, prokaryotes [PATH:mshj01100]
mshj_M00151  Cytochrome bc1 complex respiratory unit [PATH:mshj01100]
mshj_M00155  Cytochrome c oxidase, prokaryotes [PATH:mshj01100]
mshj_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:mshj01100]
mshj_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:mshj01100]
mshj_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mshj01100]
mshj_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mshj01100]
mshj_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:mshj01100]
mshj_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mshj01100]
mshj_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:mshj01100]
mshj_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mshj01100]
mshj_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:mshj01100]
mshj_M00621  Glycine cleavage system [PATH:mshj01100]
mshj_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mshj01100]
mshj_M00793  dTDP-L-rhamnose biosynthesis [PATH:mshj01100]
mshj_M00844  Arginine biosynthesis, ornithine => arginine [PATH:mshj01100]
mshj_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mshj01100]
mshj_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mshj01100]
mshj_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mshj01100]
mshj_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mshj01100]
mshj_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mshj01100]
mshj_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:mshj01100]
mshj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mshj01100]
mshj_M00970  Proline degradation, proline => glutamate [PATH:mshj01100]
Organism
Mycobacterium shinjukuense [GN:mshj]
Related
pathway
mshj00010  Glycolysis / Gluconeogenesis
mshj00020  Citrate cycle (TCA cycle)
mshj00030  Pentose phosphate pathway
mshj00040  Pentose and glucuronate interconversions
mshj00051  Fructose and mannose metabolism
mshj00052  Galactose metabolism
mshj00053  Ascorbate and aldarate metabolism
mshj00061  Fatty acid biosynthesis
mshj00071  Fatty acid degradation
mshj00100  Steroid biosynthesis
mshj00121  Secondary bile acid biosynthesis
mshj00130  Ubiquinone and other terpenoid-quinone biosynthesis
mshj00190  Oxidative phosphorylation
mshj00220  Arginine biosynthesis
mshj00230  Purine metabolism
mshj00240  Pyrimidine metabolism
mshj00250  Alanine, aspartate and glutamate metabolism
mshj00260  Glycine, serine and threonine metabolism
mshj00261  Monobactam biosynthesis
mshj00270  Cysteine and methionine metabolism
mshj00280  Valine, leucine and isoleucine degradation
mshj00290  Valine, leucine and isoleucine biosynthesis
mshj00300  Lysine biosynthesis
mshj00310  Lysine degradation
mshj00311  Penicillin and cephalosporin biosynthesis
mshj00330  Arginine and proline metabolism
mshj00332  Carbapenem biosynthesis
mshj00340  Histidine metabolism
mshj00350  Tyrosine metabolism
mshj00360  Phenylalanine metabolism
mshj00361  Chlorocyclohexane and chlorobenzene degradation
mshj00362  Benzoate degradation
mshj00364  Fluorobenzoate degradation
mshj00380  Tryptophan metabolism
mshj00400  Phenylalanine, tyrosine and tryptophan biosynthesis
mshj00401  Novobiocin biosynthesis
mshj00410  beta-Alanine metabolism
mshj00430  Taurine and hypotaurine metabolism
mshj00450  Selenocompound metabolism
mshj00460  Cyanoamino acid metabolism
mshj00470  D-Amino acid metabolism
mshj00480  Glutathione metabolism
mshj00500  Starch and sucrose metabolism
mshj00514  Other types of O-glycan biosynthesis
mshj00515  Mannose type O-glycan biosynthesis
mshj00520  Amino sugar and nucleotide sugar metabolism
mshj00521  Streptomycin biosynthesis
mshj00523  Polyketide sugar unit biosynthesis
mshj00525  Acarbose and validamycin biosynthesis
mshj00540  Lipopolysaccharide biosynthesis
mshj00541  O-Antigen nucleotide sugar biosynthesis
mshj00542  O-Antigen repeat unit biosynthesis
mshj00543  Exopolysaccharide biosynthesis
mshj00550  Peptidoglycan biosynthesis
mshj00552  Teichoic acid biosynthesis
mshj00561  Glycerolipid metabolism
mshj00562  Inositol phosphate metabolism
mshj00564  Glycerophospholipid metabolism
mshj00565  Ether lipid metabolism
mshj00571  Lipoarabinomannan (LAM) biosynthesis
mshj00572  Arabinogalactan biosynthesis - Mycobacterium
mshj00592  alpha-Linolenic acid metabolism
mshj00600  Sphingolipid metabolism
mshj00620  Pyruvate metabolism
mshj00621  Dioxin degradation
mshj00622  Xylene degradation
mshj00623  Toluene degradation
mshj00625  Chloroalkane and chloroalkene degradation
mshj00626  Naphthalene degradation
mshj00627  Aminobenzoate degradation
mshj00630  Glyoxylate and dicarboxylate metabolism
mshj00640  Propanoate metabolism
mshj00643  Styrene degradation
mshj00650  Butanoate metabolism
mshj00660  C5-Branched dibasic acid metabolism
mshj00670  One carbon pool by folate
mshj00680  Methane metabolism
mshj00710  Carbon fixation by Calvin cycle
mshj00720  Other carbon fixation pathways
mshj00730  Thiamine metabolism
mshj00740  Riboflavin metabolism
mshj00750  Vitamin B6 metabolism
mshj00760  Nicotinate and nicotinamide metabolism
mshj00770  Pantothenate and CoA biosynthesis
mshj00780  Biotin metabolism
mshj00785  Lipoic acid metabolism
mshj00790  Folate biosynthesis
mshj00860  Porphyrin metabolism
mshj00900  Terpenoid backbone biosynthesis
mshj00903  Limonene degradation
mshj00907  Pinene, camphor and geraniol degradation
mshj00910  Nitrogen metabolism
mshj00920  Sulfur metabolism
mshj00930  Caprolactam degradation
mshj00946  Degradation of flavonoids
mshj00983  Drug metabolism - other enzymes
mshj00984  Steroid degradation
mshj00999  Biosynthesis of various plant secondary metabolites
mshj01040  Biosynthesis of unsaturated fatty acids
mshj01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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