KEGG   PATHWAY: msim01200
Entry
msim01200                   Pathway                                
Name
Carbon metabolism - Mycobacterium simiae
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
msim01200  Carbon metabolism
msim01200

Module
msim_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:msim01200]
msim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msim01200]
msim_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:msim01200]
msim_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:msim01200]
msim_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:msim01200]
msim_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:msim01200]
msim_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:msim01200]
msim_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msim01200]
msim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:msim01200]
msim_M00012  Glyoxylate cycle [PATH:msim01200]
msim_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:msim01200]
msim_M00021  Cysteine biosynthesis, serine => cysteine [PATH:msim01200]
msim_M00168  CAM (Crassulacean acid metabolism), dark [PATH:msim01200]
msim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msim01200]
msim_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:msim01200]
msim_M00621  Glycine cleavage system [PATH:msim01200]
msim_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:msim01200]
Organism
Mycobacterium simiae [GN:msim]
KO pathway
ko01200   
LinkDB

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