KEGG   PATHWAY: msl01200
Entry
msl01200                    Pathway                                
Name
Carbon metabolism - Methylocella silvestris
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
msl01200  Carbon metabolism
msl01200

Module
msl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:msl01200]
msl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:msl01200]
msl_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:msl01200]
msl_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:msl01200]
msl_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:msl01200]
msl_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:msl01200]
msl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:msl01200]
msl_M00012  Glyoxylate cycle [PATH:msl01200]
msl_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:msl01200]
msl_M00021  Cysteine biosynthesis, serine => cysteine [PATH:msl01200]
msl_M00168  CAM (Crassulacean acid metabolism), dark [PATH:msl01200]
msl_M00169  CAM (Crassulacean acid metabolism), light [PATH:msl01200]
msl_M00174  Methane oxidation, methanotroph, methane => formaldehyde [PATH:msl01200]
msl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:msl01200]
msl_M00346  Formaldehyde assimilation, serine pathway [PATH:msl01200]
msl_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:msl01200]
msl_M00621  Glycine cleavage system [PATH:msl01200]
msl_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:msl01200]
Organism
Methylocella silvestris [GN:msl]
KO pathway
ko01200   
LinkDB

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