KEGG   PATHWAY: mtr01100
Entry
mtr01100                    Pathway                                
Name
Metabolic pathways - Medicago truncatula (barrel medic)
Class
Pathway map
mtr01100  Metabolic pathways
mtr01100

Module
mtr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mtr01100]
mtr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mtr01100]
mtr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mtr01100]
mtr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mtr01100]
mtr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mtr01100]
mtr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mtr01100]
mtr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mtr01100]
mtr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:mtr01100]
mtr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mtr01100]
mtr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mtr01100]
mtr_M00012  Glyoxylate cycle [PATH:mtr01100]
mtr_M00015  Proline biosynthesis, glutamate => proline [PATH:mtr01100]
mtr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mtr01100]
mtr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mtr01100]
mtr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:mtr01100]
mtr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:mtr01100]
mtr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:mtr01100]
mtr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:mtr01100]
mtr_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:mtr01100]
mtr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:mtr01100]
mtr_M00034  Methionine salvage pathway [PATH:mtr01100]
mtr_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:mtr01100]
mtr_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:mtr01100]
mtr_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:mtr01100]
mtr_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:mtr01100]
mtr_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:mtr01100]
mtr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mtr01100]
mtr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mtr01100]
mtr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mtr01100]
mtr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mtr01100]
mtr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mtr01100]
mtr_M00055  N-glycan precursor biosynthesis [PATH:mtr01100]
mtr_M00073  N-glycan precursor trimming [PATH:mtr01100]
mtr_M00081  Pectin degradation [PATH:mtr01100]
mtr_M00082  Fatty acid biosynthesis, initiation [PATH:mtr01100]
mtr_M00083  Fatty acid biosynthesis, elongation [PATH:mtr01100]
mtr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:mtr01100]
mtr_M00087  beta-Oxidation [PATH:mtr01100]
mtr_M00089  Triacylglycerol biosynthesis [PATH:mtr01100]
mtr_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:mtr01100]
mtr_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:mtr01100]
mtr_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:mtr01100]
mtr_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:mtr01100]
mtr_M00098  Acylglycerol degradation [PATH:mtr01100]
mtr_M00100  Sphingosine degradation [PATH:mtr01100]
mtr_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:mtr01100]
mtr_M00113  Jasmonic acid biosynthesis [PATH:mtr01100]
mtr_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:mtr01100]
mtr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mtr01100]
mtr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:mtr01100]
mtr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:mtr01100]
mtr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mtr01100]
mtr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mtr01100]
mtr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:mtr01100]
mtr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:mtr01100]
mtr_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:mtr01100]
mtr_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:mtr01100]
mtr_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:mtr01100]
mtr_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:mtr01100]
mtr_M00142  NADH:ubiquinone oxidoreductase, mitochondria [PATH:mtr01100]
mtr_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:mtr01100]
mtr_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:mtr01100]
mtr_M00148  Succinate dehydrogenase (ubiquinone) [PATH:mtr01100]
mtr_M00151  Cytochrome bc1 complex respiratory unit [PATH:mtr01100]
mtr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:mtr01100]
mtr_M00161  Photosystem II [PATH:mtr01100]
mtr_M00163  Photosystem I [PATH:mtr01100]
mtr_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:mtr01100]
mtr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:mtr01100]
mtr_M00169  CAM (Crassulacean acid metabolism), light [PATH:mtr01100]
mtr_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:mtr01100]
mtr_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:mtr01100]
mtr_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:mtr01100]
mtr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:mtr01100]
mtr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mtr01100]
mtr_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:mtr01100]
mtr_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:mtr01100]
mtr_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:mtr01100]
mtr_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:mtr01100]
mtr_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:mtr01100]
mtr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mtr01100]
mtr_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:mtr01100]
mtr_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:mtr01100]
mtr_M00532  Photorespiration [PATH:mtr01100]
mtr_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mtr01100]
mtr_M00555  Betaine biosynthesis, choline => betaine [PATH:mtr01100]
mtr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mtr01100]
mtr_M00621  Glycine cleavage system [PATH:mtr01100]
mtr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:mtr01100]
mtr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mtr01100]
mtr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mtr01100]
mtr_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:mtr01100]
mtr_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:mtr01100]
mtr_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:mtr01100]
mtr_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:mtr01100]
mtr_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:mtr01100]
mtr_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mtr01100]
mtr_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:mtr01100]
mtr_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:mtr01100]
mtr_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:mtr01100]
mtr_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:mtr01100]
mtr_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:mtr01100]
mtr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mtr01100]
mtr_M00940  Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:mtr01100]
mtr_M00941  Isoflavone biosynthesis, liquiritigenin/naringenin => daidzein/genistein [PATH:mtr01100]
mtr_M00942  Pterocarpan biosynthesis, daidzein => medicarpin [PATH:mtr01100]
mtr_M00970  Proline degradation, proline => glutamate [PATH:mtr01100]
mtr_M00972  Proline metabolism [PATH:mtr01100]
Organism
Medicago truncatula (barrel medic) [GN:mtr]
Related
pathway
mtr00010  Glycolysis / Gluconeogenesis
mtr00020  Citrate cycle (TCA cycle)
mtr00030  Pentose phosphate pathway
mtr00040  Pentose and glucuronate interconversions
mtr00051  Fructose and mannose metabolism
mtr00052  Galactose metabolism
mtr00053  Ascorbate and aldarate metabolism
mtr00061  Fatty acid biosynthesis
mtr00062  Fatty acid elongation
mtr00071  Fatty acid degradation
mtr00073  Cutin, suberine and wax biosynthesis
mtr00100  Steroid biosynthesis
mtr00130  Ubiquinone and other terpenoid-quinone biosynthesis
mtr00190  Oxidative phosphorylation
mtr00195  Photosynthesis
mtr00196  Photosynthesis - antenna proteins
mtr00220  Arginine biosynthesis
mtr00230  Purine metabolism
mtr00232  Caffeine metabolism
mtr00240  Pyrimidine metabolism
mtr00250  Alanine, aspartate and glutamate metabolism
mtr00260  Glycine, serine and threonine metabolism
mtr00261  Monobactam biosynthesis
mtr00270  Cysteine and methionine metabolism
mtr00280  Valine, leucine and isoleucine degradation
mtr00290  Valine, leucine and isoleucine biosynthesis
mtr00300  Lysine biosynthesis
mtr00310  Lysine degradation
mtr00330  Arginine and proline metabolism
mtr00340  Histidine metabolism
mtr00350  Tyrosine metabolism
mtr00360  Phenylalanine metabolism
mtr00380  Tryptophan metabolism
mtr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
mtr00410  beta-Alanine metabolism
mtr00430  Taurine and hypotaurine metabolism
mtr00440  Phosphonate and phosphinate metabolism
mtr00450  Selenocompound metabolism
mtr00460  Cyanoamino acid metabolism
mtr00470  D-Amino acid metabolism
mtr00480  Glutathione metabolism
mtr00500  Starch and sucrose metabolism
mtr00510  N-Glycan biosynthesis
mtr00511  Other glycan degradation
mtr00513  Various types of N-glycan biosynthesis
mtr00514  Other types of O-glycan biosynthesis
mtr00520  Amino sugar and nucleotide sugar metabolism
mtr00531  Glycosaminoglycan degradation
mtr00543  Exopolysaccharide biosynthesis
mtr00561  Glycerolipid metabolism
mtr00562  Inositol phosphate metabolism
mtr00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
mtr00564  Glycerophospholipid metabolism
mtr00565  Ether lipid metabolism
mtr00590  Arachidonic acid metabolism
mtr00591  Linoleic acid metabolism
mtr00592  alpha-Linolenic acid metabolism
mtr00600  Sphingolipid metabolism
mtr00601  Glycosphingolipid biosynthesis - lacto and neolacto series
mtr00603  Glycosphingolipid biosynthesis - globo and isoglobo series
mtr00604  Glycosphingolipid biosynthesis - ganglio series
mtr00620  Pyruvate metabolism
mtr00630  Glyoxylate and dicarboxylate metabolism
mtr00640  Propanoate metabolism
mtr00650  Butanoate metabolism
mtr00660  C5-Branched dibasic acid metabolism
mtr00670  One carbon pool by folate
mtr00710  Carbon fixation by Calvin cycle
mtr00730  Thiamine metabolism
mtr00740  Riboflavin metabolism
mtr00750  Vitamin B6 metabolism
mtr00760  Nicotinate and nicotinamide metabolism
mtr00770  Pantothenate and CoA biosynthesis
mtr00780  Biotin metabolism
mtr00785  Lipoic acid metabolism
mtr00790  Folate biosynthesis
mtr00860  Porphyrin metabolism
mtr00900  Terpenoid backbone biosynthesis
mtr00902  Monoterpenoid biosynthesis
mtr00904  Diterpenoid biosynthesis
mtr00905  Brassinosteroid biosynthesis
mtr00906  Carotenoid biosynthesis
mtr00908  Zeatin biosynthesis
mtr00909  Sesquiterpenoid and triterpenoid biosynthesis
mtr00910  Nitrogen metabolism
mtr00920  Sulfur metabolism
mtr00940  Phenylpropanoid biosynthesis
mtr00941  Flavonoid biosynthesis
mtr00943  Isoflavonoid biosynthesis
mtr00944  Flavone and flavonol biosynthesis
mtr00950  Isoquinoline alkaloid biosynthesis
mtr00960  Tropane, piperidine and pyridine alkaloid biosynthesis
mtr00965  Betalain biosynthesis
mtr00966  Glucosinolate biosynthesis
mtr00999  Biosynthesis of various plant secondary metabolites
mtr01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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