KEGG   PATHWAY: naka01100
Entry
naka01100                   Pathway                                
Name
Metabolic pathways - Nakamurella sp. PAMC28650
Class
Pathway map
naka01100  Metabolic pathways
naka01100

Module
naka_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:naka01100]
naka_M00002  Glycolysis, core module involving three-carbon compounds [PATH:naka01100]
naka_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:naka01100]
naka_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:naka01100]
naka_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:naka01100]
naka_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:naka01100]
naka_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:naka01100]
naka_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:naka01100]
naka_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:naka01100]
naka_M00012  Glyoxylate cycle [PATH:naka01100]
naka_M00015  Proline biosynthesis, glutamate => proline [PATH:naka01100]
naka_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:naka01100]
naka_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:naka01100]
naka_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:naka01100]
naka_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:naka01100]
naka_M00021  Cysteine biosynthesis, serine => cysteine [PATH:naka01100]
naka_M00026  Histidine biosynthesis, PRPP => histidine [PATH:naka01100]
naka_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:naka01100]
naka_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:naka01100]
naka_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:naka01100]
naka_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:naka01100]
naka_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:naka01100]
naka_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:naka01100]
naka_M00082  Fatty acid biosynthesis, initiation [PATH:naka01100]
naka_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:naka01100]
naka_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:naka01100]
naka_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:naka01100]
naka_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:naka01100]
naka_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:naka01100]
naka_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:naka01100]
naka_M00149  Succinate dehydrogenase, prokaryotes [PATH:naka01100]
naka_M00151  Cytochrome bc1 complex respiratory unit [PATH:naka01100]
naka_M00155  Cytochrome c oxidase, prokaryotes [PATH:naka01100]
naka_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:naka01100]
naka_M00168  CAM (Crassulacean acid metabolism), dark [PATH:naka01100]
naka_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:naka01100]
naka_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:naka01100]
naka_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:naka01100]
naka_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:naka01100]
naka_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:naka01100]
naka_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:naka01100]
naka_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:naka01100]
naka_M00555  Betaine biosynthesis, choline => betaine [PATH:naka01100]
naka_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:naka01100]
naka_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:naka01100]
naka_M00621  Glycine cleavage system [PATH:naka01100]
naka_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:naka01100]
naka_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:naka01100]
naka_M00793  dTDP-L-rhamnose biosynthesis [PATH:naka01100]
naka_M00844  Arginine biosynthesis, ornithine => arginine [PATH:naka01100]
naka_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:naka01100]
naka_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:naka01100]
naka_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:naka01100]
naka_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:naka01100]
naka_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:naka01100]
naka_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:naka01100]
naka_M00970  Proline degradation, proline => glutamate [PATH:naka01100]
naka_M00972  Proline metabolism [PATH:naka01100]
Organism
Nakamurella sp. PAMC28650 [GN:naka]
Related
pathway
naka00010  Glycolysis / Gluconeogenesis
naka00020  Citrate cycle (TCA cycle)
naka00030  Pentose phosphate pathway
naka00040  Pentose and glucuronate interconversions
naka00051  Fructose and mannose metabolism
naka00052  Galactose metabolism
naka00053  Ascorbate and aldarate metabolism
naka00061  Fatty acid biosynthesis
naka00071  Fatty acid degradation
naka00074  Mycolic acid biosynthesis
naka00130  Ubiquinone and other terpenoid-quinone biosynthesis
naka00190  Oxidative phosphorylation
naka00220  Arginine biosynthesis
naka00230  Purine metabolism
naka00240  Pyrimidine metabolism
naka00250  Alanine, aspartate and glutamate metabolism
naka00260  Glycine, serine and threonine metabolism
naka00261  Monobactam biosynthesis
naka00270  Cysteine and methionine metabolism
naka00280  Valine, leucine and isoleucine degradation
naka00290  Valine, leucine and isoleucine biosynthesis
naka00300  Lysine biosynthesis
naka00310  Lysine degradation
naka00311  Penicillin and cephalosporin biosynthesis
naka00330  Arginine and proline metabolism
naka00332  Carbapenem biosynthesis
naka00340  Histidine metabolism
naka00350  Tyrosine metabolism
naka00360  Phenylalanine metabolism
naka00361  Chlorocyclohexane and chlorobenzene degradation
naka00362  Benzoate degradation
naka00364  Fluorobenzoate degradation
naka00380  Tryptophan metabolism
naka00400  Phenylalanine, tyrosine and tryptophan biosynthesis
naka00401  Novobiocin biosynthesis
naka00410  beta-Alanine metabolism
naka00430  Taurine and hypotaurine metabolism
naka00450  Selenocompound metabolism
naka00460  Cyanoamino acid metabolism
naka00470  D-Amino acid metabolism
naka00480  Glutathione metabolism
naka00500  Starch and sucrose metabolism
naka00511  Other glycan degradation
naka00514  Other types of O-glycan biosynthesis
naka00515  Mannose type O-glycan biosynthesis
naka00520  Amino sugar and nucleotide sugar metabolism
naka00521  Streptomycin biosynthesis
naka00523  Polyketide sugar unit biosynthesis
naka00525  Acarbose and validamycin biosynthesis
naka00540  Lipopolysaccharide biosynthesis
naka00541  O-Antigen nucleotide sugar biosynthesis
naka00542  O-Antigen repeat unit biosynthesis
naka00543  Exopolysaccharide biosynthesis
naka00550  Peptidoglycan biosynthesis
naka00552  Teichoic acid biosynthesis
naka00561  Glycerolipid metabolism
naka00562  Inositol phosphate metabolism
naka00564  Glycerophospholipid metabolism
naka00572  Arabinogalactan biosynthesis - Mycobacterium
naka00592  alpha-Linolenic acid metabolism
naka00600  Sphingolipid metabolism
naka00620  Pyruvate metabolism
naka00622  Xylene degradation
naka00623  Toluene degradation
naka00624  Polycyclic aromatic hydrocarbon degradation
naka00625  Chloroalkane and chloroalkene degradation
naka00626  Naphthalene degradation
naka00627  Aminobenzoate degradation
naka00630  Glyoxylate and dicarboxylate metabolism
naka00633  Nitrotoluene degradation
naka00640  Propanoate metabolism
naka00643  Styrene degradation
naka00650  Butanoate metabolism
naka00660  C5-Branched dibasic acid metabolism
naka00670  One carbon pool by folate
naka00680  Methane metabolism
naka00710  Carbon fixation by Calvin cycle
naka00720  Other carbon fixation pathways
naka00730  Thiamine metabolism
naka00740  Riboflavin metabolism
naka00750  Vitamin B6 metabolism
naka00760  Nicotinate and nicotinamide metabolism
naka00770  Pantothenate and CoA biosynthesis
naka00780  Biotin metabolism
naka00785  Lipoic acid metabolism
naka00790  Folate biosynthesis
naka00791  Atrazine degradation
naka00860  Porphyrin metabolism
naka00900  Terpenoid backbone biosynthesis
naka00903  Limonene degradation
naka00906  Carotenoid biosynthesis
naka00907  Pinene, camphor and geraniol degradation
naka00910  Nitrogen metabolism
naka00920  Sulfur metabolism
naka00946  Degradation of flavonoids
naka00999  Biosynthesis of various plant secondary metabolites
naka01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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