PATHWAY: nake01100 Help Entry nake01100                   Pathway                                 Name Metabolic pathways - Nocardiopsis akebiae Class BRITE hierarchy Pathway map nake01100   Metabolic pathways Module nake_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nake01100] nake_M00002   Glycolysis, core module involving three-carbon compounds [PATH:nake01100] nake_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:nake01100] nake_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:nake01100] nake_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:nake01100] nake_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:nake01100] nake_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:nake01100] nake_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:nake01100] nake_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:nake01100] nake_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:nake01100] nake_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:nake01100] nake_M00012   Glyoxylate cycle [PATH:nake01100] nake_M00015   Proline biosynthesis, glutamate => proline [PATH:nake01100] nake_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:nake01100] nake_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:nake01100] nake_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:nake01100] nake_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:nake01100] nake_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:nake01100] nake_M00026   Histidine biosynthesis, PRPP => histidine [PATH:nake01100] nake_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:nake01100] nake_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:nake01100] nake_M00035   Methionine degradation [PATH:nake01100] nake_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:nake01100] nake_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:nake01100] nake_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:nake01100] nake_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:nake01100] nake_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nake01100] nake_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nake01100] nake_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:nake01100] nake_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:nake01100] nake_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:nake01100] nake_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:nake01100] nake_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:nake01100] nake_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:nake01100] nake_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:nake01100] nake_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:nake01100] nake_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:nake01100] nake_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:nake01100] nake_M00151   Cytochrome bc1 complex respiratory unit [PATH:nake01100] nake_M00155   Cytochrome c oxidase, prokaryotes [PATH:nake01100] nake_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:nake01100] nake_M00168   CAM (Crassulacean acid metabolism), dark [PATH:nake01100] nake_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nake01100] nake_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:nake01100] nake_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:nake01100] nake_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:nake01100] nake_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:nake01100] nake_M00546   Purine degradation, xanthine => urea [PATH:nake01100] nake_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:nake01100] nake_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:nake01100] nake_M00621   Glycine cleavage system [PATH:nake01100] nake_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:nake01100] nake_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:nake01100] nake_M00844   Arginine biosynthesis, ornithine => arginine [PATH:nake01100] nake_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:nake01100] nake_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:nake01100] nake_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:nake01100] nake_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:nake01100] nake_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:nake01100] nake_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:nake01100] nake_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:nake01100] nake_M00970   Proline degradation, proline => glutamate [PATH:nake01100] nake_M00972   Proline metabolism [PATH:nake01100] Organism Nocardiopsis akebiae [GN:nake] Related pathway nake00010   Glycolysis / Gluconeogenesis nake00020   Citrate cycle (TCA cycle) nake00030   Pentose phosphate pathway nake00040   Pentose and glucuronate interconversions nake00051   Fructose and mannose metabolism nake00052   Galactose metabolism nake00053   Ascorbate and aldarate metabolism nake00061   Fatty acid biosynthesis nake00071   Fatty acid degradation nake00130   Ubiquinone and other terpenoid-quinone biosynthesis nake00190   Oxidative phosphorylation nake00220   Arginine biosynthesis nake00230   Purine metabolism nake00240   Pyrimidine metabolism nake00250   Alanine, aspartate and glutamate metabolism nake00260   Glycine, serine and threonine metabolism nake00261   Monobactam biosynthesis nake00270   Cysteine and methionine metabolism nake00280   Valine, leucine and isoleucine degradation nake00290   Valine, leucine and isoleucine biosynthesis nake00300   Lysine biosynthesis nake00310   Lysine degradation nake00311   Penicillin and cephalosporin biosynthesis nake00330   Arginine and proline metabolism nake00332   Carbapenem biosynthesis nake00333   Prodigiosin biosynthesis nake00340   Histidine metabolism nake00350   Tyrosine metabolism nake00360   Phenylalanine metabolism nake00361   Chlorocyclohexane and chlorobenzene degradation nake00362   Benzoate degradation nake00380   Tryptophan metabolism nake00400   Phenylalanine, tyrosine and tryptophan biosynthesis nake00401   Novobiocin biosynthesis nake00405   Phenazine biosynthesis nake00410   beta-Alanine metabolism nake00430   Taurine and hypotaurine metabolism nake00450   Selenocompound metabolism nake00460   Cyanoamino acid metabolism nake00470   D-Amino acid metabolism nake00480   Glutathione metabolism nake00500   Starch and sucrose metabolism nake00511   Other glycan degradation nake00514   Other types of O-glycan biosynthesis nake00515   Mannose type O-glycan biosynthesis nake00520   Amino sugar and nucleotide sugar metabolism nake00521   Streptomycin biosynthesis nake00523   Polyketide sugar unit biosynthesis nake00525   Acarbose and validamycin biosynthesis nake00540   Lipopolysaccharide biosynthesis nake00541   O-Antigen nucleotide sugar biosynthesis nake00542   O-Antigen repeat unit biosynthesis nake00543   Exopolysaccharide biosynthesis nake00550   Peptidoglycan biosynthesis nake00552   Teichoic acid biosynthesis nake00561   Glycerolipid metabolism nake00562   Inositol phosphate metabolism nake00564   Glycerophospholipid metabolism nake00592   alpha-Linolenic acid metabolism nake00600   Sphingolipid metabolism nake00620   Pyruvate metabolism nake00621   Dioxin degradation nake00622   Xylene degradation nake00623   Toluene degradation nake00625   Chloroalkane and chloroalkene degradation nake00626   Naphthalene degradation nake00627   Aminobenzoate degradation nake00630   Glyoxylate and dicarboxylate metabolism nake00633   Nitrotoluene degradation nake00640   Propanoate metabolism nake00643   Styrene degradation nake00650   Butanoate metabolism nake00660   C5-Branched dibasic acid metabolism nake00670   One carbon pool by folate nake00680   Methane metabolism nake00710   Carbon fixation by Calvin cycle nake00720   Other carbon fixation pathways nake00730   Thiamine metabolism nake00740   Riboflavin metabolism nake00750   Vitamin B6 metabolism nake00760   Nicotinate and nicotinamide metabolism nake00770   Pantothenate and CoA biosynthesis nake00780   Biotin metabolism nake00785   Lipoic acid metabolism nake00790   Folate biosynthesis nake00860   Porphyrin metabolism nake00900   Terpenoid backbone biosynthesis nake00906   Carotenoid biosynthesis nake00907   Pinene, camphor and geraniol degradation nake00910   Nitrogen metabolism nake00920   Sulfur metabolism nake00930   Caprolactam degradation nake00946   Degradation of flavonoids nake00998   Biosynthesis of various antibiotics nake00999   Biosynthesis of various plant secondary metabolites nake01040   Biosynthesis of unsaturated fatty acids nake01051   Biosynthesis of ansamycins nake01053   Biosynthesis of siderophore group nonribosomal peptides nake01055   Biosynthesis of vancomycin group antibiotics nake01056   Biosynthesis of type II polyketide backbone nake01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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