PATHWAY: nie01100 Help Entry nie01100                    Pathway                                 Name Metabolic pathways - Nocardia iowensis Class BRITE hierarchy Pathway map nie01100   Metabolic pathways Module nie_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nie01100] nie_M00002   Glycolysis, core module involving three-carbon compounds [PATH:nie01100] nie_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:nie01100] nie_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:nie01100] nie_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:nie01100] nie_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:nie01100] nie_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:nie01100] nie_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:nie01100] nie_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:nie01100] nie_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:nie01100] nie_M00012   Glyoxylate cycle [PATH:nie01100] nie_M00015   Proline biosynthesis, glutamate => proline [PATH:nie01100] nie_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:nie01100] nie_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:nie01100] nie_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:nie01100] nie_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:nie01100] nie_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:nie01100] nie_M00026   Histidine biosynthesis, PRPP => histidine [PATH:nie01100] nie_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:nie01100] nie_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:nie01100] nie_M00035   Methionine degradation [PATH:nie01100] nie_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:nie01100] nie_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:nie01100] nie_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:nie01100] nie_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nie01100] nie_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nie01100] nie_M00082   Fatty acid biosynthesis, initiation [PATH:nie01100] nie_M00083   Fatty acid biosynthesis, elongation [PATH:nie01100] nie_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:nie01100] nie_M00087   beta-Oxidation [PATH:nie01100] nie_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:nie01100] nie_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:nie01100] nie_M00095   C5 isoprenoid biosynthesis, mevalonate pathway [PATH:nie01100] nie_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:nie01100] nie_M00098   Acylglycerol degradation [PATH:nie01100] nie_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:nie01100] nie_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:nie01100] nie_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:nie01100] nie_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:nie01100] nie_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:nie01100] nie_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:nie01100] nie_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:nie01100] nie_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:nie01100] nie_M00149   Succinate dehydrogenase, prokaryotes [PATH:nie01100] nie_M00151   Cytochrome bc1 complex respiratory unit [PATH:nie01100] nie_M00155   Cytochrome c oxidase, prokaryotes [PATH:nie01100] nie_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:nie01100] nie_M00168   CAM (Crassulacean acid metabolism), dark [PATH:nie01100] nie_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:nie01100] nie_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nie01100] nie_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:nie01100] nie_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:nie01100] nie_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:nie01100] nie_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:nie01100] nie_M00546   Purine degradation, xanthine => urea [PATH:nie01100] nie_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:nie01100] nie_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:nie01100] nie_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:nie01100] nie_M00621   Glycine cleavage system [PATH:nie01100] nie_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:nie01100] nie_M00793   dTDP-L-rhamnose biosynthesis [PATH:nie01100] nie_M00844   Arginine biosynthesis, ornithine => arginine [PATH:nie01100] nie_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:nie01100] nie_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:nie01100] nie_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:nie01100] nie_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:nie01100] nie_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:nie01100] nie_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:nie01100] nie_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:nie01100] nie_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:nie01100] nie_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:nie01100] nie_M00970   Proline degradation, proline => glutamate [PATH:nie01100] Organism Nocardia iowensis [GN:nie] Related pathway nie00010   Glycolysis / Gluconeogenesis nie00020   Citrate cycle (TCA cycle) nie00030   Pentose phosphate pathway nie00040   Pentose and glucuronate interconversions nie00051   Fructose and mannose metabolism nie00052   Galactose metabolism nie00053   Ascorbate and aldarate metabolism nie00061   Fatty acid biosynthesis nie00071   Fatty acid degradation nie00100   Steroid biosynthesis nie00121   Secondary bile acid biosynthesis nie00130   Ubiquinone and other terpenoid-quinone biosynthesis nie00190   Oxidative phosphorylation nie00220   Arginine biosynthesis nie00230   Purine metabolism nie00240   Pyrimidine metabolism nie00250   Alanine, aspartate and glutamate metabolism nie00260   Glycine, serine and threonine metabolism nie00261   Monobactam biosynthesis nie00270   Cysteine and methionine metabolism nie00280   Valine, leucine and isoleucine degradation nie00290   Valine, leucine and isoleucine biosynthesis nie00300   Lysine biosynthesis nie00310   Lysine degradation nie00311   Penicillin and cephalosporin biosynthesis nie00330   Arginine and proline metabolism nie00332   Carbapenem biosynthesis nie00340   Histidine metabolism nie00350   Tyrosine metabolism nie00360   Phenylalanine metabolism nie00361   Chlorocyclohexane and chlorobenzene degradation nie00362   Benzoate degradation nie00364   Fluorobenzoate degradation nie00380   Tryptophan metabolism nie00400   Phenylalanine, tyrosine and tryptophan biosynthesis nie00401   Novobiocin biosynthesis nie00405   Phenazine biosynthesis nie00410   beta-Alanine metabolism nie00430   Taurine and hypotaurine metabolism nie00450   Selenocompound metabolism nie00460   Cyanoamino acid metabolism nie00470   D-Amino acid metabolism nie00480   Glutathione metabolism nie00500   Starch and sucrose metabolism nie00511   Other glycan degradation nie00514   Other types of O-glycan biosynthesis nie00515   Mannose type O-glycan biosynthesis nie00520   Amino sugar and nucleotide sugar metabolism nie00521   Streptomycin biosynthesis nie00523   Polyketide sugar unit biosynthesis nie00524   Neomycin, kanamycin and gentamicin biosynthesis nie00525   Acarbose and validamycin biosynthesis nie00541   O-Antigen nucleotide sugar biosynthesis nie00542   O-Antigen repeat unit biosynthesis nie00543   Exopolysaccharide biosynthesis nie00550   Peptidoglycan biosynthesis nie00552   Teichoic acid biosynthesis nie00561   Glycerolipid metabolism nie00562   Inositol phosphate metabolism nie00564   Glycerophospholipid metabolism nie00565   Ether lipid metabolism nie00592   alpha-Linolenic acid metabolism nie00600   Sphingolipid metabolism nie00620   Pyruvate metabolism nie00621   Dioxin degradation nie00622   Xylene degradation nie00623   Toluene degradation nie00625   Chloroalkane and chloroalkene degradation nie00626   Naphthalene degradation nie00627   Aminobenzoate degradation nie00630   Glyoxylate and dicarboxylate metabolism nie00640   Propanoate metabolism nie00643   Styrene degradation nie00650   Butanoate metabolism nie00660   C5-Branched dibasic acid metabolism nie00670   One carbon pool by folate nie00680   Methane metabolism nie00710   Carbon fixation by Calvin cycle nie00720   Other carbon fixation pathways nie00730   Thiamine metabolism nie00740   Riboflavin metabolism nie00750   Vitamin B6 metabolism nie00760   Nicotinate and nicotinamide metabolism nie00770   Pantothenate and CoA biosynthesis nie00780   Biotin metabolism nie00785   Lipoic acid metabolism nie00790   Folate biosynthesis nie00791   Atrazine degradation nie00860   Porphyrin metabolism nie00900   Terpenoid backbone biosynthesis nie00903   Limonene degradation nie00906   Carotenoid biosynthesis nie00907   Pinene, camphor and geraniol degradation nie00910   Nitrogen metabolism nie00920   Sulfur metabolism nie00930   Caprolactam degradation nie00946   Degradation of flavonoids nie00984   Steroid degradation nie00997   Biosynthesis of various other secondary metabolites nie00998   Biosynthesis of various antibiotics nie00999   Biosynthesis of various plant secondary metabolites nie01040   Biosynthesis of unsaturated fatty acids nie01053   Biosynthesis of siderophore group nonribosomal peptides nie01055   Biosynthesis of vancomycin group antibiotics nie01056   Biosynthesis of type II polyketide backbone nie01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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