KEGG   PATHWAY: nim01100
Entry
nim01100                    Pathway                                
Name
Metabolic pathways - Candidatus Nitrotoga sp. AM1P
Class
Pathway map
nim01100  Metabolic pathways
nim01100

Module
nim_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nim01100]
nim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:nim01100]
nim_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:nim01100]
nim_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:nim01100]
nim_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:nim01100]
nim_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:nim01100]
nim_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:nim01100]
nim_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:nim01100]
nim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:nim01100]
nim_M00015  Proline biosynthesis, glutamate => proline [PATH:nim01100]
nim_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:nim01100]
nim_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:nim01100]
nim_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:nim01100]
nim_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:nim01100]
nim_M00021  Cysteine biosynthesis, serine => cysteine [PATH:nim01100]
nim_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:nim01100]
nim_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:nim01100]
nim_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:nim01100]
nim_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:nim01100]
nim_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:nim01100]
nim_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:nim01100]
nim_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nim01100]
nim_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nim01100]
nim_M00063  CMP-KDO biosynthesis [PATH:nim01100]
nim_M00082  Fatty acid biosynthesis, initiation [PATH:nim01100]
nim_M00083  Fatty acid biosynthesis, elongation [PATH:nim01100]
nim_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:nim01100]
nim_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:nim01100]
nim_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:nim01100]
nim_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:nim01100]
nim_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:nim01100]
nim_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:nim01100]
nim_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:nim01100]
nim_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:nim01100]
nim_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:nim01100]
nim_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:nim01100]
nim_M00149  Succinate dehydrogenase, prokaryotes [PATH:nim01100]
nim_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:nim01100]
nim_M00168  CAM (Crassulacean acid metabolism), dark [PATH:nim01100]
nim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nim01100]
nim_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:nim01100]
nim_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:nim01100]
nim_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:nim01100]
nim_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:nim01100]
nim_M00621  Glycine cleavage system [PATH:nim01100]
nim_M00793  dTDP-L-rhamnose biosynthesis [PATH:nim01100]
nim_M00844  Arginine biosynthesis, ornithine => arginine [PATH:nim01100]
nim_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:nim01100]
nim_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:nim01100]
nim_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:nim01100]
nim_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:nim01100]
nim_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:nim01100]
nim_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:nim01100]
Organism
Candidatus Nitrotoga sp. AM1P [GN:nim]
Related
pathway
nim00010  Glycolysis / Gluconeogenesis
nim00020  Citrate cycle (TCA cycle)
nim00030  Pentose phosphate pathway
nim00040  Pentose and glucuronate interconversions
nim00051  Fructose and mannose metabolism
nim00052  Galactose metabolism
nim00061  Fatty acid biosynthesis
nim00071  Fatty acid degradation
nim00074  Mycolic acid biosynthesis
nim00130  Ubiquinone and other terpenoid-quinone biosynthesis
nim00190  Oxidative phosphorylation
nim00220  Arginine biosynthesis
nim00230  Purine metabolism
nim00240  Pyrimidine metabolism
nim00250  Alanine, aspartate and glutamate metabolism
nim00260  Glycine, serine and threonine metabolism
nim00261  Monobactam biosynthesis
nim00270  Cysteine and methionine metabolism
nim00280  Valine, leucine and isoleucine degradation
nim00290  Valine, leucine and isoleucine biosynthesis
nim00300  Lysine biosynthesis
nim00310  Lysine degradation
nim00330  Arginine and proline metabolism
nim00332  Carbapenem biosynthesis
nim00340  Histidine metabolism
nim00350  Tyrosine metabolism
nim00360  Phenylalanine metabolism
nim00361  Chlorocyclohexane and chlorobenzene degradation
nim00362  Benzoate degradation
nim00364  Fluorobenzoate degradation
nim00380  Tryptophan metabolism
nim00400  Phenylalanine, tyrosine and tryptophan biosynthesis
nim00401  Novobiocin biosynthesis
nim00410  beta-Alanine metabolism
nim00430  Taurine and hypotaurine metabolism
nim00450  Selenocompound metabolism
nim00470  D-Amino acid metabolism
nim00480  Glutathione metabolism
nim00500  Starch and sucrose metabolism
nim00520  Amino sugar and nucleotide sugar metabolism
nim00521  Streptomycin biosynthesis
nim00523  Polyketide sugar unit biosynthesis
nim00525  Acarbose and validamycin biosynthesis
nim00540  Lipopolysaccharide biosynthesis
nim00541  O-Antigen nucleotide sugar biosynthesis
nim00543  Exopolysaccharide biosynthesis
nim00550  Peptidoglycan biosynthesis
nim00552  Teichoic acid biosynthesis
nim00561  Glycerolipid metabolism
nim00562  Inositol phosphate metabolism
nim00564  Glycerophospholipid metabolism
nim00592  alpha-Linolenic acid metabolism
nim00620  Pyruvate metabolism
nim00623  Toluene degradation
nim00625  Chloroalkane and chloroalkene degradation
nim00626  Naphthalene degradation
nim00627  Aminobenzoate degradation
nim00630  Glyoxylate and dicarboxylate metabolism
nim00633  Nitrotoluene degradation
nim00640  Propanoate metabolism
nim00650  Butanoate metabolism
nim00660  C5-Branched dibasic acid metabolism
nim00670  One carbon pool by folate
nim00680  Methane metabolism
nim00710  Carbon fixation by Calvin cycle
nim00720  Other carbon fixation pathways
nim00730  Thiamine metabolism
nim00740  Riboflavin metabolism
nim00750  Vitamin B6 metabolism
nim00760  Nicotinate and nicotinamide metabolism
nim00770  Pantothenate and CoA biosynthesis
nim00780  Biotin metabolism
nim00785  Lipoic acid metabolism
nim00790  Folate biosynthesis
nim00860  Porphyrin metabolism
nim00900  Terpenoid backbone biosynthesis
nim00906  Carotenoid biosynthesis
nim00907  Pinene, camphor and geraniol degradation
nim00910  Nitrogen metabolism
nim00920  Sulfur metabolism
nim00999  Biosynthesis of various plant secondary metabolites
nim01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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