KEGG   PATHWAY: nir01100
Entry
nir01100                    Pathway                                
Name
Metabolic pathways - Candidatus Nitrosopumilus sediminis
Class
Pathway map
nir01100  Metabolic pathways
nir01100

Module
nir_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:nir01100]
nir_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:nir01100]
nir_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:nir01100]
nir_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:nir01100]
nir_M00031  Lysine biosynthesis, mediated by LysW, 2-aminoadipate => lysine [PATH:nir01100]
nir_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:nir01100]
nir_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:nir01100]
nir_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nir01100]
nir_M00149  Succinate dehydrogenase, prokaryotes [PATH:nir01100]
nir_M00159  V/A-type ATPase, prokaryotes [PATH:nir01100]
nir_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:nir01100]
nir_M00365  C10-C20 isoprenoid biosynthesis, archaea [PATH:nir01100]
nir_M00378  F420 biosynthesis, archaea [PATH:nir01100]
nir_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:nir01100]
nir_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:nir01100]
nir_M00793  dTDP-L-rhamnose biosynthesis [PATH:nir01100]
nir_M00849  C5 isoprenoid biosynthesis, mevalonate pathway, archaea [PATH:nir01100]
nir_M00896  Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:nir01100]
nir_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:nir01100]
nir_M00970  Proline degradation, proline => glutamate [PATH:nir01100]
Organism
Candidatus Nitrosopumilus sediminis [GN:nir]
Related
pathway
nir00010  Glycolysis / Gluconeogenesis
nir00020  Citrate cycle (TCA cycle)
nir00030  Pentose phosphate pathway
nir00051  Fructose and mannose metabolism
nir00052  Galactose metabolism
nir00061  Fatty acid biosynthesis
nir00071  Fatty acid degradation
nir00130  Ubiquinone and other terpenoid-quinone biosynthesis
nir00190  Oxidative phosphorylation
nir00220  Arginine biosynthesis
nir00230  Purine metabolism
nir00240  Pyrimidine metabolism
nir00250  Alanine, aspartate and glutamate metabolism
nir00260  Glycine, serine and threonine metabolism
nir00261  Monobactam biosynthesis
nir00270  Cysteine and methionine metabolism
nir00280  Valine, leucine and isoleucine degradation
nir00290  Valine, leucine and isoleucine biosynthesis
nir00300  Lysine biosynthesis
nir00310  Lysine degradation
nir00330  Arginine and proline metabolism
nir00340  Histidine metabolism
nir00350  Tyrosine metabolism
nir00360  Phenylalanine metabolism
nir00361  Chlorocyclohexane and chlorobenzene degradation
nir00362  Benzoate degradation
nir00364  Fluorobenzoate degradation
nir00400  Phenylalanine, tyrosine and tryptophan biosynthesis
nir00401  Novobiocin biosynthesis
nir00410  beta-Alanine metabolism
nir00430  Taurine and hypotaurine metabolism
nir00450  Selenocompound metabolism
nir00460  Cyanoamino acid metabolism
nir00470  D-Amino acid metabolism
nir00480  Glutathione metabolism
nir00500  Starch and sucrose metabolism
nir00520  Amino sugar and nucleotide sugar metabolism
nir00521  Streptomycin biosynthesis
nir00523  Polyketide sugar unit biosynthesis
nir00525  Acarbose and validamycin biosynthesis
nir00542  O-Antigen repeat unit biosynthesis
nir00543  Exopolysaccharide biosynthesis
nir00552  Teichoic acid biosynthesis
nir00561  Glycerolipid metabolism
nir00562  Inositol phosphate metabolism
nir00564  Glycerophospholipid metabolism
nir00620  Pyruvate metabolism
nir00623  Toluene degradation
nir00625  Chloroalkane and chloroalkene degradation
nir00626  Naphthalene degradation
nir00627  Aminobenzoate degradation
nir00630  Glyoxylate and dicarboxylate metabolism
nir00640  Propanoate metabolism
nir00650  Butanoate metabolism
nir00660  C5-Branched dibasic acid metabolism
nir00670  One carbon pool by folate
nir00680  Methane metabolism
nir00710  Carbon fixation by Calvin cycle
nir00720  Other carbon fixation pathways
nir00730  Thiamine metabolism
nir00740  Riboflavin metabolism
nir00750  Vitamin B6 metabolism
nir00760  Nicotinate and nicotinamide metabolism
nir00770  Pantothenate and CoA biosynthesis
nir00780  Biotin metabolism
nir00790  Folate biosynthesis
nir00860  Porphyrin metabolism
nir00900  Terpenoid backbone biosynthesis
nir00910  Nitrogen metabolism
nir00920  Sulfur metabolism
KO pathway
ko01100   
LinkDB

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