PATHWAY: nja01100 Help Entry nja01100                    Pathway                                 Name Metabolic pathways - Nitrospira japonica Class BRITE hierarchy Pathway map nja01100   Metabolic pathways Module nja_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:nja01100] nja_M00002   Glycolysis, core module involving three-carbon compounds [PATH:nja01100] nja_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:nja01100] nja_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:nja01100] nja_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:nja01100] nja_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:nja01100] nja_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:nja01100] nja_M00015   Proline biosynthesis, glutamate => proline [PATH:nja01100] nja_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:nja01100] nja_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:nja01100] nja_M00021   Cysteine biosynthesis, serine => cysteine [PATH:nja01100] nja_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:nja01100] nja_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:nja01100] nja_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:nja01100] nja_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:nja01100] nja_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:nja01100] nja_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:nja01100] nja_M00063   CMP-KDO biosynthesis [PATH:nja01100] nja_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:nja01100] nja_M00082   Fatty acid biosynthesis, initiation [PATH:nja01100] nja_M00083   Fatty acid biosynthesis, elongation [PATH:nja01100] nja_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:nja01100] nja_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:nja01100] nja_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:nja01100] nja_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:nja01100] nja_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:nja01100] nja_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:nja01100] nja_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:nja01100] nja_M00140   C1-unit interconversion, prokaryotes [PATH:nja01100] nja_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:nja01100] nja_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:nja01100] nja_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:nja01100] nja_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:nja01100] nja_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:nja01100] nja_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:nja01100] nja_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:nja01100] nja_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:nja01100] nja_M00621   Glycine cleavage system [PATH:nja01100] nja_M00793   dTDP-L-rhamnose biosynthesis [PATH:nja01100] nja_M00844   Arginine biosynthesis, ornithine => arginine [PATH:nja01100] nja_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:nja01100] nja_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:nja01100] nja_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:nja01100] nja_M00896   Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:nja01100] nja_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:nja01100] nja_M00970   Proline degradation, proline => glutamate [PATH:nja01100] Organism Nitrospira japonica [GN:nja] Related pathway nja00010   Glycolysis / Gluconeogenesis nja00020   Citrate cycle (TCA cycle) nja00030   Pentose phosphate pathway nja00040   Pentose and glucuronate interconversions nja00051   Fructose and mannose metabolism nja00052   Galactose metabolism nja00053   Ascorbate and aldarate metabolism nja00061   Fatty acid biosynthesis nja00071   Fatty acid degradation nja00100   Steroid biosynthesis nja00130   Ubiquinone and other terpenoid-quinone biosynthesis nja00190   Oxidative phosphorylation nja00220   Arginine biosynthesis nja00230   Purine metabolism nja00240   Pyrimidine metabolism nja00250   Alanine, aspartate and glutamate metabolism nja00260   Glycine, serine and threonine metabolism nja00261   Monobactam biosynthesis nja00270   Cysteine and methionine metabolism nja00280   Valine, leucine and isoleucine degradation nja00290   Valine, leucine and isoleucine biosynthesis nja00300   Lysine biosynthesis nja00310   Lysine degradation nja00330   Arginine and proline metabolism nja00332   Carbapenem biosynthesis nja00340   Histidine metabolism nja00350   Tyrosine metabolism nja00360   Phenylalanine metabolism nja00361   Chlorocyclohexane and chlorobenzene degradation nja00362   Benzoate degradation nja00364   Fluorobenzoate degradation nja00380   Tryptophan metabolism nja00400   Phenylalanine, tyrosine and tryptophan biosynthesis nja00401   Novobiocin biosynthesis nja00405   Phenazine biosynthesis nja00410   beta-Alanine metabolism nja00430   Taurine and hypotaurine metabolism nja00440   Phosphonate and phosphinate metabolism nja00450   Selenocompound metabolism nja00460   Cyanoamino acid metabolism nja00470   D-Amino acid metabolism nja00480   Glutathione metabolism nja00500   Starch and sucrose metabolism nja00520   Amino sugar and nucleotide sugar metabolism nja00521   Streptomycin biosynthesis nja00523   Polyketide sugar unit biosynthesis nja00525   Acarbose and validamycin biosynthesis nja00540   Lipopolysaccharide biosynthesis nja00541   O-Antigen nucleotide sugar biosynthesis nja00542   O-Antigen repeat unit biosynthesis nja00543   Exopolysaccharide biosynthesis nja00550   Peptidoglycan biosynthesis nja00552   Teichoic acid biosynthesis nja00561   Glycerolipid metabolism nja00562   Inositol phosphate metabolism nja00564   Glycerophospholipid metabolism nja00565   Ether lipid metabolism nja00592   alpha-Linolenic acid metabolism nja00620   Pyruvate metabolism nja00622   Xylene degradation nja00623   Toluene degradation nja00625   Chloroalkane and chloroalkene degradation nja00626   Naphthalene degradation nja00630   Glyoxylate and dicarboxylate metabolism nja00640   Propanoate metabolism nja00643   Styrene degradation nja00650   Butanoate metabolism nja00660   C5-Branched dibasic acid metabolism nja00670   One carbon pool by folate nja00680   Methane metabolism nja00710   Carbon fixation by Calvin cycle nja00720   Other carbon fixation pathways nja00730   Thiamine metabolism nja00740   Riboflavin metabolism nja00750   Vitamin B6 metabolism nja00760   Nicotinate and nicotinamide metabolism nja00770   Pantothenate and CoA biosynthesis nja00780   Biotin metabolism nja00785   Lipoic acid metabolism nja00790   Folate biosynthesis nja00860   Porphyrin metabolism nja00900   Terpenoid backbone biosynthesis nja00906   Carotenoid biosynthesis nja00907   Pinene, camphor and geraniol degradation nja00909   Sesquiterpenoid and triterpenoid biosynthesis nja00910   Nitrogen metabolism nja00920   Sulfur metabolism nja00930   Caprolactam degradation nja00998   Biosynthesis of various antibiotics nja00999   Biosynthesis of various plant secondary metabolites nja01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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